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scnpilot_p_inoc_scaffold_0_curated_136

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(145529..145783)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 166
  • Evalue 1.60e-38
rpoZ; DNA-directed RNA polymerase, subunit K/omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 84.0
  • Bit_score: 163
  • Evalue 4.00e-38
DNA-directed RNA polymerase subunit omega n=2 Tax=Microbacterium RepID=H8E9X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 165
  • Evalue 3.30e-38

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGACGTGACAAGGGCATCATCGACCCGCCCATCGACGCGCTGCTCGACAAGGTCGACTCGAAGTACCAGCTCGTGATCTACGCGTCCAAGCGCGCACGTCAGATCAACGACAACTACTCCGATCTGCACGAGGGCAACCTCTTCGACAACGTGGGTCCGCTCGTCGACTCCACCGTCGAGGACAAGCCGCTGACGATCGCGCTCCACGAGATCCACGAGGACAAGCTGCGCCTCAAGGCTGCGGAGTAA
PROTEIN sequence
Length: 85
MAGRDKGIIDPPIDALLDKVDSKYQLVIYASKRARQINDNYSDLHEGNLFDNVGPLVDSTVEDKPLTIALHEIHEDKLRLKAAE*