ggKbase home page

scnpilot_expt_750_p_scaffold_455_curated_6

Organism: scnpilot_dereplicated_Micrococcales_2

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(4595..9046)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 999.99
  • Bit_score: 2139
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 999.99
  • Bit_score: 2115
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=7720829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 999.99
  • Bit_score: 2173
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4452
ATGCTCGACGTCCACGCGTTCGACGAGATCCGCATCGGCCTGGCCACGGCCGACGACATCCGCAAGTGGTCCTTCGGCGAGGTGAAGAAGCCGGAGACCATCAACTACCGCACGCTGAAGCCGGAGAAGGACGGCCTCTTCGGCGAGCAGATCTTCGGCCCGTCCCGCGACTGGGAGTGCGCCTGCGGGAAGTACAAGCGGGTCCGGTTCAAGGGCATCGTGTGCGAGCGCTGCGGCGTCGAGGTCACCAAGTCCTCGGTCCGCCGCGAGCGGATGGGCCACATCGAGCTCGCCGCGCCGGTCACGCACATCTGGTACTTCAAGGGCGTGCCGAGCCGGCTCGGCTACCTCCTCGACATGGCGCCGAAGGACCTGGAGAAGGTCATCTACTTCGCCGCCTACATGGTCATCTCGGTCGACGAGCAGGCCCGCCACGAGGACCTGCCCGGCCTCGAGAACGAGCTGCGGCTCGAGATCAAGACGCTCGAGGACCAGCGCGACGCGGCCGTGAACGCCCGGCTGAGCCGGCTCGAGACCGACCTCGCCGCGCTCGAGGAGGAGGGCGCGAAGGCCGATCAGAAGAAGCGCACCCGCGACGCGGCGGAGAAGGAGGCGGCCCAGGTCCGCAAGTCCTTCGACGACGAGATCGCGCAGCTGGAGCGCGTCTGGGACGACTTCCGCAGCCTCAAGGTCGGCGACCTCAAGCCCGAGGACGCGATCTTCCAGGAGCTGCAGTACCGCTACGGCCTGTACTTCGAGGCGCACATGGGCGCCGAGGCGATCCAGCGCCGGCTCGAGTCCTTCGACCTGGCCGCCGAGGCGGAGCGGCTGCACGACGAGATCGCCAACGGCAAGGGCCAGCGCAAGATCCGCGCGATCAAGCGGCTCAAGGTCGTCAACTCGTTCCTGACCACCGGCCACTCGCCGGCCGCGATGGTGCTCGACGTGGTCCCGGTCATCCCGCCGGAGCTGCGCCCGATGGTCCAGCTCGACGGCGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTACCGCCGCGTCATCAACCGGAACAACCGCCTCCGTCGCCTGCTCGACCTCGGCGCCCCGGAGATCATCGTCAACAACGAGAAGCGCATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGTCGCGGCCGGCCGGTCACCGGCACGGGCAACCGCGCGCTGAAGTCGCTCTCCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGGCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGCTCGGTCATCATCGCCGGTCCGCAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTCATCAAGCGGCTCATCGACCTCGGCTTCTCGCAGAACATCAAGTCCGCGAAGCGCAAGGTCGAGCGCAGCGACCCGCAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGGCCCGTGCTGCTGAACCGTGCGCCGACGCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCGCAGCTCGTCGAGGGCAAGGCGATCCAGCTGCACCCGCTGGTGTGCACCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTCCACCTGCCGCTGTCCGTCGAGGCGCAGGCCGAGGCGCGCGTCCTGATGCTCGCGAGCAACAACATCCGCAAGCCGTCCGACGGCCGCCCGGTGGCGCTGCCGAGCCAGGACATGATCATCGGCCTGCACCACCTCACGACGGTCAAGGAGGGCGCGGTCGGCGAGGGCCGGGCGTTCACCTCGGTCGCCGAGGCGATCCTCGCGAAGGACCAGGGCACGCTCGACCTGAACGCGGTCGTCAAGCTGCGCCTGGGCGGCGAGCTGCGGGAGACCACGCTCGGCCGCGCCGTCTTCAACGAGGCGCTGCCGGTGGACTACCCGTACTACGAGGGCCTCGCGGACAAGTCGTCGATCGGCCGGATCGTCAACGACCTCGCGGAGCGCTACCCGCAGGTGGAGGTCGCCGCGACGCTCGACCGGATCAAGGACGCGGGCTTCCAGTGGGCGACCCGCTCCGGCGTCACGGTCGCGCTCTCGGACATCGTCACCCCGCCGAACAAGGGCCAGATCATCGCCTCGTACGAGAAGCAGGCGGAGAAGGTGCAGAGCCAGTTCGAGAAGGGCCTGACCACGCCCGAGGAGCGCCGTCAGGAGCTCATCGAGATCTGGAACAAGGCGACCGCCGAGGTCGCGGACGCGATGCAGAAGAACTTCCCGACGGACAACAACATCAACCGCATGGTGTCGTCCGGCGCGCGAGGCAACTGGATGCAGGTCCGTCAGATCGCCGGCATGCGCGGCCTGGTGTCGAACCCGAAGGGCGAGATCATCCCGCGCCCGATCGTGCACTCCTACAAGGAGGGCCTGACGGTCGCGGAGTACTTCATCTCGACCCACGGCGCCCGCAAGGGCCTCGCCGACACGGCGCTGCGCACCGCGGACTCGGGCTACCTGACGCGGCGTCTGGTCGACGTCTCGCAGGACGTCATCATCCGCGAGCTCGACTGCGGCACCACCAAGGGCCTCGACTTCACGATCGCGAAGCCGGTCGACGGCGTGCTCGTCCGCGACGAGAACGTCGAGAACTCGGTGTACTCGCGCAACCTCGCCGAGGACGCGACCGACGCCAAGGGCAACGTGATCGCCGAGGCCGGCAGCGACGTCGGCGACGTGCTCATCGACTCGCTCATCCAGGCCGGCATCGAGACCGTCAAGGTCCGCTCGGTGCTGACCTGCGAGTCGGTGGTCGGCGTCTGCGCGAACTGCTACGGCCGCTCGCTGGCGACCGGTCACCTCGTCGACATCGGCGAGGCGGTCGGCATCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACGCAGCTCACGATGCGCACCTTCCACACCGGCGGCGTCGCCTCCGCGGACGACATCACGCAGGGTCTGCCCCGTGTGACGGAGCTCTTCGAGGCGCGCACCCCGAAGTCGGTCTCGCCGATCGCCGAGGCGGCCGGCACGATCAAGATCGACGACACGGACGCCCGCGGCCGCAAGATCGTGCTCACGCCGGACAACGGCGACGAGCCGATCGCCTACACGGTGCTGCGCCGCGCGACGCTCATGGTCGAGGACGGCCAGCACGTCGAGCTCGGCCAGCAGTTCCACGTCGGCAACCTCGACCCGAAGGAGGTCCTCCGGGTCCGCGGGGTCCGCGCGGTGCAGCAGCACCTCGTCGACGGGGTGCAGGGCGTCTACCGCTCGCAGGGCGTGCCGATCCACGACAAGCACATCGAGGTCATCGTCCGGCAGATGCTCCGCAAGGTGACGGTCGTCGACCACGGCGACACCGAGCTGCTGCCGGGCGAGCTGGTGGACCGCCAGCGCTACACGGAGATCAACCGCGCCGCGCTCGGCGAGGGCCGTCGTCCGGCCTCCGCCCGCCAGGAGGTCATGGGCATCACGAAGGCGTCGCTCGCGACGGAGTCGTGGCTGTCCGCGGCCTCCTTCCAGGAGACCACCCGCGTGCTCACGCAGGCGGCGATGGAGGGCAAGTCCGACCCGCTGATGGGCCTCAAGGAGAACGTCATCATCGGCAAGCTCATCCCGGCCGGCACGGGGCTCCCGCTCTACCGCCAGGTGGAGGTGCGCGCGACCGACGAGGCCCGCGCCGAGCGGTACCCGAACCGGCTGTTCGCCGACGACGGCGCCTTCGGCGACTCGGACTACTCCTACGTCGAGTTCGACGACTTCGCGTNNNNNNNNNNNNNNGACCTCCGCGGCCCGCCGATCCCGCTCCTCGCGGGCTACAGTGGCCTGATCCGCCGCGGGACCGGCGCGGACAGGCCCCGCCATGCCACGCCCGCAGCTCCTTCCGGCGCTCGGATGAGCGCGCCGGCCGACCTGCTCGTCCTGCTCGCCCAGCTCTGGCTCGCCGGGGCGAGCGTCGCGCTCGCGGGGATCGACCTCGCGCTCCGGCGGCTGCCCGACCGGATCGTGCTGCCCACGATCGTCGTGCTCGCCGCGCTGCTCGCCGCCGCGTCGGCGCTGCGGCACGACCCGGAGCCGCTGCTGCGCGCGCTGGCCGGCGGCGCGGCGCTGCTCGCCGGCCACCTGCTGCTCGCGCTCGTCTCCCGCGGGGGCCTGGGGCTCGGCGACGTCAAGCTGTCCGCGGCGCTCGGGCTGGCGACCGCCTGGGTCGGCTGGGAGGCGCTCGTGCTCGGCGCGGTCGCGTCCTTCCTGCTCGGCGGGGCCGTCGGCGGCGGGCTGCTGCTCGCCCGCCGGGCGCGGCGGCGCACCGCGCTGCCCTTTGGGCCCTGGATGCTCGCCGGGGCGTGGATCGGCATCCTCGCCGGCCCCGCGGCCGCGTCCTGGACCGCCGCGGCGCTCGGCCCGGCGGCGGCCGCGTGA
PROTEIN sequence
Length: 1484
MLDVHAFDEIRIGLATADDIRKWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEQARHEDLPGLENELRLEIKTLEDQRDAAVNARLSRLETDLAALEEEGAKADQKKRTRDAAEKEAAQVRKSFDDEIAQLERVWDDFRSLKVGDLKPEDAIFQELQYRYGLYFEAHMGAEAIQRRLESFDLAAEAERLHDEIANGKGQRKIRAIKRLKVVNSFLTTGHSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIAGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGFSQNIKSAKRKVERSDPQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCTAFNADFDGDQMAVHLPLSVEAQAEARVLMLASNNIRKPSDGRPVALPSQDMIIGLHHLTTVKEGAVGEGRAFTSVAEAILAKDQGTLDLNAVVKLRLGGELRETTLGRAVFNEALPVDYPYYEGLADKSSIGRIVNDLAERYPQVEVAATLDRIKDAGFQWATRSGVTVALSDIVTPPNKGQIIASYEKQAEKVQSQFEKGLTTPEERRQELIEIWNKATAEVADAMQKNFPTDNNINRMVSSGARGNWMQVRQIAGMRGLVSNPKGEIIPRPIVHSYKEGLTVAEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIRELDCGTTKGLDFTIAKPVDGVLVRDENVENSVYSRNLAEDATDAKGNVIAEAGSDVGDVLIDSLIQAGIETVKVRSVLTCESVVGVCANCYGRSLATGHLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVTELFEARTPKSVSPIAEAAGTIKIDDTDARGRKIVLTPDNGDEPIAYTVLRRATLMVEDGQHVELGQQFHVGNLDPKEVLRVRGVRAVQQHLVDGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTELLPGELVDRQRYTEINRAALGEGRRPASARQEVMGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLMGLKENVIIGKLIPAGTGLPLYRQVEVRATDEARAERYPNRLFADDGAFGDSDYSYVEFDDFAXXXXXDLRGPPIPLLAGYSGLIRRGTGADRPRHATPAAPSGARMSAPADLLVLLAQLWLAGASVALAGIDLALRRLPDRIVLPTIVVLAALLAAASALRHDPEPLLRALAGGAALLAGHLLLALVSRGGLGLGDVKLSAALGLATAWVGWEALVLGAVASFLLGGAVGGGLLLARRARRRTALPFGPWMLAGAWIGILAGPAAASWTAAALGPAAAA*