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SCNpilot_expt_300_bf_scaffold_299_curated_16

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(17459..18679)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVU5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 385.0
  • Bit_score: 643
  • Evalue 1.20e-181
Histidine kinase {ECO:0000313|EMBL:KIO48903.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 404.0
  • Bit_score: 668
  • Evalue 8.10e-189
response regulator receiver/diguanylate phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 404.0
  • Bit_score: 624
  • Evalue 3.00e-176

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGTCGAACGATCCGCTATCAGGATTCTGGTGCTTGACGATGAATCCTTCATGCTCAAGCTGCTCAACCGTGTTCTTGCCAATCTCGGATTTACATCGGTAATACTGTGCGATAGCGGGCGTGTTGCGCTGGAAAGCATCGATGCAAACTCGCGGCCCAACATTATCCTGCTGGATCTCAACATGCCGGAAATGGATGGAATAGAATTCGTGCGCCATCTCGTCGAGCGCCATTATACCGGCAGCCTCATCCTGGTCAGCGGGGAGGATGAGCGCATGTTGCAGACTGCCGAGAAACTGGTGCAGGCGCACAAGATTCCCATACTGGGGCATCTGCACAAGCCGGTCCGGCCGGAATCGTTATCCCTGCTGCTCGATAAATGGACTCCTCCTTCCAGCAGCGGCCAGGGGATACCAAAAAAAGTTTACCACGCGGAGGAATTGCAGGCTGCCCTAAACAATCGGGAGCTGGTCAATTACTACCAGCCGAAGGTTGCGGTCGCGAGCGGCGAGGTGATTGGCGTCGAGACGCTGGTGCGCTGGAACCATCCGGTGGATGGGCTCGTATTTCCCGATATGTTCATCGGGGTGGCCGAAGCTTTCGGACTGATCGACGAACTGACACAACGGGTTTTCAGCAATGCGCTGATCCAGGCAAAAGTGTGGAGAGAGGAGGGAATCCGGCTTCGCGTTGCCGTGAACGTGTCGATGGATAATCTGGCATCCTTGAGTTTCCTGAATTTTGTTGCTGATATGACTGCCGAAGTCGGCATCGCTCCCCAGGATATCGTGCTGGAAGTGACGGAAAGCCGCTTGATGCAGGATACGCGGGCACCGCTTGAGATACTCACGCGGCTGCGCCTGAAGCGTTTCCGGCTATCCATCGACGACTTTGGCACCGGGCATTCCTCCCTGGCTCAGTTGCGTGATATTCCCTTCGATGAACTCAAGATTGACCAGGGGTTTGTCCACCACGCCTGGAGCAATGAGACCCTGATGGCGATGTATGAAGCCAGTCTGTCACTGGCGAGGCAATTAGGCATGGAAGTTGTTGCCGAAGGTGTGGAAGACCGGAATGACTGGGATCTTCTGCAGCGCACGGGCTGCGATCTCGCGCAGGGAGCTTTTGTTTCCCGGCCCATGCTGCCTGCAGAACTACCCGGCTGGATCGAGATCTGGCACGAGCGCGTGCGGACCGAGCTTTCCCTTGGGAAGCGCTGA
PROTEIN sequence
Length: 407
MVERSAIRILVLDDESFMLKLLNRVLANLGFTSVILCDSGRVALESIDANSRPNIILLDLNMPEMDGIEFVRHLVERHYTGSLILVSGEDERMLQTAEKLVQAHKIPILGHLHKPVRPESLSLLLDKWTPPSSSGQGIPKKVYHAEELQAALNNRELVNYYQPKVAVASGEVIGVETLVRWNHPVDGLVFPDMFIGVAEAFGLIDELTQRVFSNALIQAKVWREEGIRLRVAVNVSMDNLASLSFLNFVADMTAEVGIAPQDIVLEVTESRLMQDTRAPLEILTRLRLKRFRLSIDDFGTGHSSLAQLRDIPFDELKIDQGFVHHAWSNETLMAMYEASLSLARQLGMEVVAEGVEDRNDWDLLQRTGCDLAQGAFVSRPMLPAELPGWIEIWHERVRTELSLGKR*