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SCNpilot_expt_300_bf_scaffold_140_curated_22

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(24544..25173)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 197.0
  • Bit_score: 262
  • Evalue 3.80e-67
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KIO50091.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 189.0
  • Bit_score: 301
  • Evalue 1.00e-78
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 197.0
  • Bit_score: 262
  • Evalue 1.20e-67

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
TTGATACCATTGCTTGCGAAACAAGCGACGCGCAAATCCAATTCCAATAAGGCAATTGTCCTGGCTACTCAACAGGAATTTTCAAATTTTCTGGCTCAAATTGAAAGACGGGCCTATAAGCAGGCGTTATTCGCGGTACGTGACGAGCATCTGGCGCTGGATATCGTTCAGGAGTCCATGATGAAGCTCGTGGAGAAATACGCTGCCAAGCCATCGGAAGAACTCCCTCTTCTGTTCCAGCGCATCCTGCAAAACACCATTCGGGATTTTTACCGGAGGCAAAAGACGCGGTCTCTATGGACCACGTTGTTTTCATCATTCACCTCCGGCAAGGAAAACGAAAATGAGGACTACGATTTCCTGGAAACTTTGCGCGTGGAGAGCGCATCGAATCCAGGCAATCCGCAGGAAAAACTGGAACAATCGGAATCTATCCGCGTGATCGAGAGGGCGCTCTCCGACCTGCCGGCGCGTCAACGGGAAGCCTTTCTGCTGCGTTACTGGGAGGATATGGATGTTTCGGAAACGGCAAAGATCATGGGATGTTCCGAAGGAAGCGTAAAGACGCATTGTTCCCGCGCAACCCATGCCCTTGCCATCGTGCTGAGTAAAAAGGGAATTACGTTATGA
PROTEIN sequence
Length: 210
LIPLLAKQATRKSNSNKAIVLATQQEFSNFLAQIERRAYKQALFAVRDEHLALDIVQESMMKLVEKYAAKPSEELPLLFQRILQNTIRDFYRRQKTRSLWTTLFSSFTSGKENENEDYDFLETLRVESASNPGNPQEKLEQSESIRVIERALSDLPARQREAFLLRYWEDMDVSETAKIMGCSEGSVKTHCSRATHALAIVLSKKGITL*