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scnpilot_p_inoc_scaffold_85_curated_36

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(63453..66620)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RQ41_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 999.99
  • Bit_score: 789
  • Evalue 3.40e-225
TonB-dependent receptor {ECO:0000313|EMBL:GAO30835.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 999.99
  • Bit_score: 955
  • Evalue 8.60e-275
TonB-linked outer membrane protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 999.99
  • Bit_score: 710
  • Evalue 8.30e-202

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3168
ATGATACATAAACATATGAAATACAAATCCATACGATGGATTTTCCTGATGGCTTTTCTGATTGCAGGCCTCAATGCCGTAGCTGCCGGAACTACCGTGACAGGAATTGTAAGGGATGCACGCACCAAATTGCCGATAAGTGCCGCCCGGATTAGTTCGGTAAACGATAAAGCTTCGGCTACTACCAACGAAGAAGGAAAGTTTACGATCACCATCAACGTGCAGGGAGGTCTGCTTCACGTAAAGGCTTTCGAATATGCCGACCGGGAAATAGCGGTCAGAGGTCGTTCGGAACTCATTATCGATCTGTATCCCGGCTCGTTTCGTGAGCGTATTTTATATCCGGCCGGTTTAACAGGAACCGAACACAGTACCTTTCACACAGGCAATATTCGTCCGGTAAGTGAGTTCGATAAAACGACCAGTTCATCGCCCGAACAGGAGATCCAACTCCAGTTAGGGGCCGATGCGCGTTCGCTGAGTCGTTCGTCGGCTACGGGACTTGGCAATTCGACATTTATCAGGGGAATGAATTCGCTGAATGCGAATGCGCAGCCTTTGTATGTGGTGGATGGAGTGATCCGTAATAACCTGTACGATGTGGCCTCCATTCATGAAGGTTTTTATGGTAATCCGCTGTCGTTCTTATCCAGCAGCGATATCCGGTCGATCAGTTTACTGAAGGACGGAACATCCTTGTACGGAAGTAAAGGAGCCAATGGAGTGATTCTGATCAATACAAAGCGGGGGACCGACCTGGCCACTAAGATCGATTTACGCATTACCGGCGGAATTACCGATGCTCCCCGCACTATCCCGGTGATGAACGCCGATCAATACCGGACCTATCTTACCGATATCTTAGGTACTTCGGGAATGAGTAACCAGCAAATCGCGCAGTTACCTTACCTCAACGACGATCCGAAGCGGTCGACCTACAATACCTATCACAACAGGACCAACTGGAGCGATGAAGTGTATCGTACCGGTTACTCTCAAAACTATTCGATAAGTGTTGATGGCGGCGGCGAAAAAGCCATGTATTATTTTTCGCTGGGATATACTACCAACCAATCGAACGTTAAGCATACCGATTACCAGCGTTACTCCATGCGCCTTAACTCGGACCTTAAATTATCGGATATAGTCACCACCGGTATTAATATCGGTATTACGAGTCTGGATCGCACCTTGCTCGACGATGGTGCCAATCCGGTTTCATCTCCGGTGTGGATCGCGCAGGTAAAATCGCCCTTCCTGAGCCCCTACACCTTTACTTTTCAGGGAGAACAGACCACCGAACATGCTTATGCCGATATTTTCGACCTCAGCAATCCGGTTGCTTTGTTGAGCCGGTCGATCAATACCGTGAAGCAAAATAGTTTTACATTCGGATTACTCCCGAAAGTCAGGATCTCGAAACAACTGGAACTTTCTACACAGTTCGATTATTACCTCAATAAAACCAATGAAGACTACTACCGGCCTTATCTCTATTCGTCGGCTGTTGAAAAGCAAGGTGTAGGCTGGTCGTATAACTCCCGGTCGAGCCAGGTATATCGCGACAATACCCTATTCAATCATCTTCAGCTGCGTTACAATAAAGAACTGTCGCCCGGAATGCTTTTAAACGTGGTGGCCGGCAACCGCTTCCTGTATGAATATTTTGAATCGGATTATGTCGAAGGTCACAATTCGATGACCAATTCATCGATTAACCTGCGCGGAAGCTTCCGTAATTTGTTTACCGACGGAACCAACGAACTCACCAAATCGATTTCCAACTACCTGAACGTGGATTACAAACATCATAATAAATATTTCCTGAACCTTACTGCAGCCCTCGATGCTTCCAGCCGGTTCGGATCCGAAGTAGAAGGCGGTATTGATTTGTTGGGCACTACCTGGGCCTTTTTCCCATCGGCAAGTGCTGCCTGGCTGGTTTCCTCCGAAACGTTTATGAAAGATCTTGGATGGCTCAATCACTTCAAACTACGTACGGGCATTGATCGGACAGGCAACGACGACATTATGCCCTATCAATCGGAGGCCTACTTCACAGCAATTCGCTTCAAAAGTGTAGCCAACGGGATGATTTTAAACAACCTGGCCAATCCGTCGATTAAGTGGGAAACTACCTCGCGCGTTTATGCGGGTACCGATATCGGTCTGGCGAACGACCGGATACACTTAAATTTTGATGTGTACAAAGCTGTCACTACCGATCTGCTGGTACGGAAAGATGTGCCCGAAGTGGCAGGATTGACCTGGTATACCACCAACGAAGGGAGTTTGTCGAATACCGGCTTCGAGCTTGGTGTGGATGTAAAAGTACTTAACCTGAAGGCATTCCAGTGGGAAGTCAATGTATCGGCGGGCCGGTACATCAATACCATCGAATCCTTACCTTCCGGCGAGTTTACCACCTCGATCCCGGGCGGCGAAGTGCTTACCCGTGTCGGTCAATCGGCAGGAGTATTCTATGGGTACAAAACGAAAGGCGTGTTTGCCGGCGAAGCCGAAGCAGCACAGGCAAACCTGAGTCTGTTGAATGAGCAAGGTAAGTATGTGGCATTCGGTGCCGGCGATACTCATTTTGAAGATGTTTCGGGACCGAATGGATCGCCCGATGGTATCATCGACGCATTCGACCGGCAAATAATCGGCAATCCGAATCCCGATTTTTATGGTTCGGTATCCACTAAAATCACCCTGGGCAACCTGAGTATCTCGGCCTTGCTGACAGGTTCGTATGGCAATGATGTGTTTAATTATCCACGTTACCTGCTCGAATCGGGAAAAGATTTCAGTAATCAGAGCCCGGTGATGCTGACCCGGTGGACCGCCGAAGGACAAACAACCCGGCAGCCTCGCGCCGTATACGGCGATCCGATGGGGAATTCACGGTTTTCCGACCGCTGGATCGAAGACGCTTCATACCTTCGGCTGAAAAACCTTACCGTAGCCTATCAGCTGCCTTTAAAACAGAGTGGTTTTATAAACGGTGTAAATATATGGGCATCGGCCAATAACCTGGCGCTCTGGACCGGTTACCTGGGAGCCGACCCCGAGGTTTCGGCTTCGAACAGTGTGCTGATGCAGGGAGTCGATATGGGATTTGCCCCTCAAAGCCGTAGTTACTACCTGGGACTGAAAATCAACTTATAA
PROTEIN sequence
Length: 1056
MIHKHMKYKSIRWIFLMAFLIAGLNAVAAGTTVTGIVRDARTKLPISAARISSVNDKASATTNEEGKFTITINVQGGLLHVKAFEYADREIAVRGRSELIIDLYPGSFRERILYPAGLTGTEHSTFHTGNIRPVSEFDKTTSSSPEQEIQLQLGADARSLSRSSATGLGNSTFIRGMNSLNANAQPLYVVDGVIRNNLYDVASIHEGFYGNPLSFLSSSDIRSISLLKDGTSLYGSKGANGVILINTKRGTDLATKIDLRITGGITDAPRTIPVMNADQYRTYLTDILGTSGMSNQQIAQLPYLNDDPKRSTYNTYHNRTNWSDEVYRTGYSQNYSISVDGGGEKAMYYFSLGYTTNQSNVKHTDYQRYSMRLNSDLKLSDIVTTGINIGITSLDRTLLDDGANPVSSPVWIAQVKSPFLSPYTFTFQGEQTTEHAYADIFDLSNPVALLSRSINTVKQNSFTFGLLPKVRISKQLELSTQFDYYLNKTNEDYYRPYLYSSAVEKQGVGWSYNSRSSQVYRDNTLFNHLQLRYNKELSPGMLLNVVAGNRFLYEYFESDYVEGHNSMTNSSINLRGSFRNLFTDGTNELTKSISNYLNVDYKHHNKYFLNLTAALDASSRFGSEVEGGIDLLGTTWAFFPSASAAWLVSSETFMKDLGWLNHFKLRTGIDRTGNDDIMPYQSEAYFTAIRFKSVANGMILNNLANPSIKWETTSRVYAGTDIGLANDRIHLNFDVYKAVTTDLLVRKDVPEVAGLTWYTTNEGSLSNTGFELGVDVKVLNLKAFQWEVNVSAGRYINTIESLPSGEFTTSIPGGEVLTRVGQSAGVFYGYKTKGVFAGEAEAAQANLSLLNEQGKYVAFGAGDTHFEDVSGPNGSPDGIIDAFDRQIIGNPNPDFYGSVSTKITLGNLSISALLTGSYGNDVFNYPRYLLESGKDFSNQSPVMLTRWTAEGQTTRQPRAVYGDPMGNSRFSDRWIEDASYLRLKNLTVAYQLPLKQSGFINGVNIWASANNLALWTGYLGADPEVSASNSVLMQGVDMGFAPQSRSYYLGLKINL*