ggKbase home page

scnpilot_p_inoc_scaffold_465_curated_46

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 60904..64185

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DYE9_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 999.99
  • Bit_score: 1365
  • Evalue 0.0
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD94312.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 999.99
  • Bit_score: 1365
  • Evalue 0.0
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 999.99
  • Bit_score: 792
  • Evalue 1.70e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides intestinalis CAG:315 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3282
ATGAGCAAGCTATGTAATTCACGCATTTCTGAAATTATGAAAAGAAAACGGTGTTTTCTAAGTGTTCTGGCGGCATTCATTTGTATCTCAATAAATTCAGTCTATGCCGGGAACCTGATGCAGAGTCAAAGGTTTGTACGAGGGAAGGTCGTTGATAAAGAAGGTCTGCCATTAATCGGGGTGAGTATTGTAGAGAAAGGTACGGGCAATGGTACTGTTTCGGATATTCAGGGAGTTTTCGGTCTGACAGTATTGAATACCGACCCGGTGCTCCTGTTTTCGTATGTAGGATATAAAACGGCGGAAATCCTGCCCGGAGAAAAGAACCATATTCATGTAGTACTTCAGGAAGAACTCGAATTGCTCGATGAAGTAGTAGTTGTCGGGTATGGTACGAAGCGAAAAGGCAATCTGGCCGCATCGGTTAGTACGGTCCGCAATGAAGATATCATCCGTTCGGCATCAACAACTACGGCAGGGGCAATTGTAGGCAAAATGGCAGGGATCACCTCCCGCCAGAAGTCCGGAACGCCAGGATCGTCAGCGTCGCTTCAGATTCGTAATATGGGAACTCCGCTGTATGTTATCGATGGCGTAATGACAGATGAAGGGGCTTTTAATAATCTGGACATTCATGATATCGATAATATCTCTGTCTTAAAAGATGGTGCAGCCGCGATATATGGATTCAAGGCCTCGAATGGGGTGGTGTTGGTAACTACAAAAAAAGGAGGTAAGAATCAAAAACAGCAGGTAAATATCAATGCCTATACCGGTTTTCAGCAATGGACGGAATATCCTGACCTGTTAAATGCATATCAGTGGAATTATGCGAACGATATGGCAGATGTAAATGCCGGAACATTAAAAGACCCCCTTGCTATTGCAGCAAAAAAAGAGGCTTTGGAAAAATGGAGAACAGGTTACTACAACGCCGAAACGGGCGAAGATTACAGAGGATATGATTGGTACGGCAATTTCGTTGATAATGCAGCCCCTCAGAGTTACGTGAATGCCAACGTCAACGGAGGATCCGAGAATACAACATATTATATATCGGTAGGTCATGTTAGTCAGGATGCGGTGTTTAAAGATTATAATTTTAATCGTACCAATATGACGGCAAATTTTAATGTCGATCTGACTGATCGTTGGAAAATTGGCGTACAGGTTCTCGGAAAAATAGAAAACCGTACCAACCCGGCTCTCCCGGGTAGCGATGATTACGCGGAAATGCGGTCGTCATTATATAACTTGTTACCTGTTTGGCGTCCCTATGCAAATGATAATCCTGATTATCTGAATTTTATGGCAGGGCATGACGCAGCACGCAATATGGCCGCGTATACAATCGATAACGCGGGAGAATTTAAAGAAACCTGGCGTACTGTTCAGCCGATTTTCAATATTGATTACGATATTCCTGTAAAAGGGCTGAAATTTAAGTCTTTGTTGTCATATTATTACGGAGATAAGAATACTTCAAACTTTGAAAAAGGATGGAAAGAATACACCTATAACCAGCAGGGAAAGGTTTATGAAGAAAAGTACGACCGGGTCGCTTTAGGTCAGACCTATTTGGGAAAAGAAACCGAACATGTGGAAGAACTGACAGGCCAGACTTACCTGGATTTTGACCGGATTTTCGGAAATATTCATCAGGTAACGGCTACGGTGGGTTTCGAATTTTATAAAAGGGCGTGGAATAGTTTGATTATTTACCAAACTCCTGCGAATAATACCTTTATAAGTTTGCTGACCGATAGCGAAAACAATAAGGTGATAAATGATGCTTTGAATTACAGTACTGCAAGCTGGGTATTTCGTGCGGGTTATGTTTATGACCAAAGATATATTATTGATTTCGCGAGTCGTTATGATGCGTCATGGCGTTTTCAACAGGGGAATCAGTGGGGCTTTTTTCCTTCCTTGTCCGGAGCATGGCGGATCTCGGAAGAAGATTTCTTTAAAGGTTCGGAAATTTCATCCTGGTTGTCGAACCTGAAGTTGAGAGTGTCTTATGGCTCCATGGGAAGTGATGCCCTGAGTACCGGGATATATCCGTATTTTGCTTATCTTCCAGGATATAACTATGATAAAGGTGGAGCAATTATCACCTCCAATCCGATTTCAGGAGGGGCCGATAATATGGTTATTGGGAGTCAATCGAAGGGATTGCCGGTTACCAACCTGACCTGGATTAAAACCGCGATTACTAACGTGGGAATCGATCTTGGTTTTTTCGATAACCACCTGACTGCTGAATTCGATGCGTTTCAAAGAGTACGTGATGGCATTCCTGCATATCCCGATGATGTGACATATCCTCTCGAGAGTGGATTTCTTGCAATGGCTCAGAATTTAAACTCTGATAAAACGCTCGGAGTGGATGGGTTTATCAAGTGGAATGATAAAATCGGCGACTTTACTTATTCTGTCGGAGTCAATGCTACGCTGGCACGGCAAATGAATGGAAAGCGCTATGGAGAATTGTTTTTAAATGCCTGGGACCGGTACAGGTGGTCGCAGGAAAACAGATGGGCCAATGTGCAGAATGGCGAAATCTGGATGTGGGAAACGATTGGGGTTTTTCAGACTCAGGAAGAAATTGATAATTATCCGGTAAATATAGACGGGGCTAATAATACGAATCTCAGACCGGGTGATCTTATTTTCAGAGATATCAATGAAGATGGCATTATCGATGATTTTGACAAAAGGCCCTTGGGCTATGCCGCTGCCGACTGGCCGTGGGACTCCTCAAAAGGAAATAAAAACCCCTTGTTGTCATTCGGATTAAACCTGGGAGTTGAATGGAAGGGAATTGATTTTGCTGCTGACCTTGCAGGTGGAAGTATGAATACCTTTGTTCCCGACTGGCATGTAAAATACGGTCCTTCACGTACTCAAACCGGTTTTGTTTATAACTCGCTGGATGTGTGGCATCATGAAGACATCTACGATCCGACATCGCCCTGGGTTCCGGGTAAGTTTCCTGCGCCGGCCGGTTGGAACAATCCTTCGCTTCGTAGCTGGAATGATTACTATACTAAAGAAATAAATTATGTCCGTTTGAGGAATTTGGTCCTGGGCTACACGCTTCCTGTAAAATACACAAAAAAAATTCTGATTGAAAAATTAAGATTTTATTTTGAGGGAAGTAATCTTTTTTGCCTTGACAGTCTGGAAGATTATGGTTTTGATCCTGAAATATCGACTGTTACCGGATTCGATTATCCCCAACATCGTACCTGTTTATTTGGTATCAATCTAACATTCTAA
PROTEIN sequence
Length: 1094
MSKLCNSRISEIMKRKRCFLSVLAAFICISINSVYAGNLMQSQRFVRGKVVDKEGLPLIGVSIVEKGTGNGTVSDIQGVFGLTVLNTDPVLLFSYVGYKTAEILPGEKNHIHVVLQEELELLDEVVVVGYGTKRKGNLAASVSTVRNEDIIRSASTTTAGAIVGKMAGITSRQKSGTPGSSASLQIRNMGTPLYVIDGVMTDEGAFNNLDIHDIDNISVLKDGAAAIYGFKASNGVVLVTTKKGGKNQKQQVNINAYTGFQQWTEYPDLLNAYQWNYANDMADVNAGTLKDPLAIAAKKEALEKWRTGYYNAETGEDYRGYDWYGNFVDNAAPQSYVNANVNGGSENTTYYISVGHVSQDAVFKDYNFNRTNMTANFNVDLTDRWKIGVQVLGKIENRTNPALPGSDDYAEMRSSLYNLLPVWRPYANDNPDYLNFMAGHDAARNMAAYTIDNAGEFKETWRTVQPIFNIDYDIPVKGLKFKSLLSYYYGDKNTSNFEKGWKEYTYNQQGKVYEEKYDRVALGQTYLGKETEHVEELTGQTYLDFDRIFGNIHQVTATVGFEFYKRAWNSLIIYQTPANNTFISLLTDSENNKVINDALNYSTASWVFRAGYVYDQRYIIDFASRYDASWRFQQGNQWGFFPSLSGAWRISEEDFFKGSEISSWLSNLKLRVSYGSMGSDALSTGIYPYFAYLPGYNYDKGGAIITSNPISGGADNMVIGSQSKGLPVTNLTWIKTAITNVGIDLGFFDNHLTAEFDAFQRVRDGIPAYPDDVTYPLESGFLAMAQNLNSDKTLGVDGFIKWNDKIGDFTYSVGVNATLARQMNGKRYGELFLNAWDRYRWSQENRWANVQNGEIWMWETIGVFQTQEEIDNYPVNIDGANNTNLRPGDLIFRDINEDGIIDDFDKRPLGYAAADWPWDSSKGNKNPLLSFGLNLGVEWKGIDFAADLAGGSMNTFVPDWHVKYGPSRTQTGFVYNSLDVWHHEDIYDPTSPWVPGKFPAPAGWNNPSLRSWNDYYTKEINYVRLRNLVLGYTLPVKYTKKILIEKLRFYFEGSNLFCLDSLEDYGFDPEISTVTGFDYPQHRTCLFGINLTF*