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SCNpilot_cont_1000_bf_scaffold_97_curated_12

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11713..12591

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CEE4B similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 566
  • Evalue 1.70e-158
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ97001.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 292.0
  • Bit_score: 560
  • Evalue 1.30e-156
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 289.0
  • Bit_score: 490
  • Evalue 3.70e-136

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCGAAATCTGGATATCGACCTGTTGCGCACTTTCGTGGCGATTGCGCAGCACGAGACGTTTGCGGCAGCCGCCACGCGCGTGGGACGCACCCAGTCTGCCATCACCCAGCAGATGCAGCGGCTCGAACAGGAGATGGGGTGCGCGCTGTTCGAAAAGCAGGGCCGGCAGAAGGCGATGACCGCCGATGGCGTGCGGCTCGTGGCCTATGCGAACAAGATCCTGGCGCTCAACGACCAGGCCGTACAGGTCATGCAAACGCGCGGACCGGTGGAAAAGCTGCGCATTGGATCGCCGCACGACGTGGCCGACTCGATTCTGCCGAGCATGTTGCGACGGTTATCGAAACTCTCGGCGGAATTGCAGTTGGAGATCATCGTCGGCCGCAGCCCGCATTTGATGGACGCCCTGCGCGACAAGGAGCTGGATCTGGCGATCTCGACGCGCTACGACGAAGCCTTCCCCGGCATCAAGCTGCGCACTTCGCCGATGGTGTGGATCTGTGCCGACGACTTCATCTTCAATTCGTCCGCGCCTGTGCCGCTGGTGATGGCCGACGAACTGAGCCTGTTTCGCCGCCTGTCCATCGAGCGGCTCAACGCGGCGGGCATCGCCTGGCGCACGAGCTTCATCTCGCCGACACTGACCGGCATCAGGGCGGCGATCAGCGCGGGCCTCGGGGTGACAGCTCGCACCACCGAGCTGCTCGATGCGAACATGCGCGTGCTCTCTGAAGCCGACGGCCTGCCGCGCTTGCCCGACGTCGCGTTCTATCTATACGTGCAGCCGACGTGTACAAGTCAGGTCCTGCGCGAATTGTTCGAGTCGACGGAGCACATCGCCACGCGCTTCGGTCCACCGTTTCTGATCGGCGAGTAA
PROTEIN sequence
Length: 293
MRNLDIDLLRTFVAIAQHETFAAAATRVGRTQSAITQQMQRLEQEMGCALFEKQGRQKAMTADGVRLVAYANKILALNDQAVQVMQTRGPVEKLRIGSPHDVADSILPSMLRRLSKLSAELQLEIIVGRSPHLMDALRDKELDLAISTRYDEAFPGIKLRTSPMVWICADDFIFNSSAPVPLVMADELSLFRRLSIERLNAAGIAWRTSFISPTLTGIRAAISAGLGVTARTTELLDANMRVLSEADGLPRLPDVAFYLYVQPTCTSQVLRELFESTEHIATRFGPPFLIGE*