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SCNpilot_cont_1000_bf_scaffold_97_curated

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_97_curated_1
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1142
DNA (1140bp) protein (380aa)
Hemolysin n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5ARN2_BURRH
Hemolysin
Hemolysin {ECO:0000313|EMBL:CBW75264.1}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
SCNpilot_cont_1000_bf_scaffold_97_curated_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..2378
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X031_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON12798.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2684..2935
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PR82_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHB05471.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3439..4665
DNA (1227bp) protein (409aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
ampC; beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003466272
SCNpilot_cont_1000_bf_scaffold_97_curated_5
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5931)
DNA (1191bp) protein (397aa)
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036B0A70
Cystathionine beta-lyase {ECO:0000313|EMBL:KHQ97008.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6027..7628)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C4896
Rhodanese domain-containing protein {ECO:0000313|EMBL:EON12735.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rhodanese domain-containing protein
SCNpilot_cont_1000_bf_scaffold_97_curated_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7786..8382)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034927A7
Uncharacterized protein {ECO:0000313|EMBL:KHQ97006.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_8
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8492..9265)
DNA (774bp) protein (258aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D6C5D
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC23174.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_9
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9295..9987)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003453A9A
Amino acid ABC transporter transmembrane protein {ECO:0000313|EMBL:EON12738.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_97_curated_10
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9992..10684)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348F7BD
ABC transporter permease {ECO:0000313|EMBL:AJC15501.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
amino acids ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_97_curated_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10700..11524)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B0F35
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE98325.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
solute-binding protein
SCNpilot_cont_1000_bf_scaffold_97_curated_12
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11713..12591
DNA (879bp) protein (293aa)
transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CEE4B
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ97001.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_97_curated_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12706..12975
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003492959
Transcriptional repressor rcnR {ECO:0000313|EMBL:KHQ95783.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
RSp0553; hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_14
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12989..13618
DNA (630bp) protein (210aa)
ABC multidrug efflux pump, ATPase subunit (EC:3.6.3.41); K10834 heme-transporting ATPase [EC:3.6.3.41]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CDCD6
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KHQ96996.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_15
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13816..15684
DNA (1869bp) protein (623aa)
methyl-accepting chemotaxis protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003449E3F
Chemotaxis protein {ECO:0000313|EMBL:AJE98318.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
Methyl-accepting chemotaxis protein
SCNpilot_cont_1000_bf_scaffold_97_curated_trna_1
unknown

Not on your lists

15741..15822
DNA (82bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_97_curated_16
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15904..16419)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036DDA05
Membrane protein {ECO:0000313|EMBL:KHD18223.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16419..17816)
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036CC514
sensor histidine kinase
SCNpilot_cont_1000_bf_scaffold_97_curated_18
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17792..18457)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B856E
XRE family transcriptional regulator {ECO:0000313|EMBL:AHB77923.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
mmfR; transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_1000_bf_scaffold_97_curated_19
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18481..19239)
DNA (759bp) protein (253aa)
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C8D41
Uncharacterized protein {ECO:0000313|EMBL:EON13047.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_20
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19262..20038)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C1E59
Uncharacterized protein {ECO:0000313|EMBL:EXI88506.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_97_curated_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20116..20712)
DNA (597bp) protein (199aa)
UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CC9AD
Phosphoesterase {ECO:0000313|EMBL:AIU26085.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20980..21540)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CD050
Cytochrome B561 {ECO:0000313|EMBL:AHB05348.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
cytochrome B561; K12262 cytochrome b561
SCNpilot_cont_1000_bf_scaffold_97_curated_23
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21706..22116)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034612BC
Uncharacterized protein {ECO:0000313|EMBL:AHB06005.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_1000_bf_scaffold_97_curated_24
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22294..24687)
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037FF856
Pirin {ECO:0000313|EMBL:KAK43718.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
P-type HAD superfamily ATPase
SCNpilot_cont_1000_bf_scaffold_97_curated_25
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24811..24993)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C21DE
MFS transporter {ECO:0000313|EMBL:KAK45474.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
transporter MFS general substrate transporter domain; K08369 MFS transporter, putative metabolite:H+ symporter
SCNpilot_cont_1000_bf_scaffold_97_curated_26
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25279..25827
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034810CE
h16_A1837; hypothetical protein
Hypothetical membrane associated protein {ECO:0000313|EMBL:CAJ92940.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
SCNpilot_cont_1000_bf_scaffold_97_curated_27
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25853..26503
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003465D83
nnr; transcriptional regulator, NNR like
Transcriptional regulator, NNR like {ECO:0000313|EMBL:CAJ92941.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
SCNpilot_cont_1000_bf_scaffold_97_curated_28
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26703..27701
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D5F16
SAM-dependent methyltransferase {ECO:0000313|EMBL:KHD18216.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
methyltransferase
SCNpilot_cont_1000_bf_scaffold_97_curated_29
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27835..28167)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003652919
Uncharacterized protein {ECO:0000313|EMBL:AGW95382.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
blue (type1) copper domain-containing protein
Displaying items 1-30 of 129 in total

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