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scnpilot_p_inoc_scaffold_420_curated_135

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 172277..174082

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csd1 family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SM29_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 615.0
  • Bit_score: 307
  • Evalue 2.90e-80
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EYF05347.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 613.0
  • Bit_score: 310
  • Evalue 4.80e-81
CRISPR-associated RAMP Csd1 family protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 610.0
  • Bit_score: 306
  • Evalue 2.00e-80

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGATCCTCAAGGAACTCGCCGACCTCGCCCGCCGCGACGGCCTCCTCGAAGACCCCGACTTCGAACCCAAGCCCGTCCGGTGGGTCGTCAACCTCGGCCGGGGGGGGAAGTTCCTGAACGTGACCGAGACGATGGGGACGGATGCGAAAGGCAAACCGCGCCCCCAGGTCGCCCAGGTCCCCATCTCCAGGGCGAGGACGAGCGGATCGGTCGCCTGCTTCCTGGTCGACAAGCCCGAATACGCCCTGGGCTACGACCCCGACGACAACCCCCGGAAGGTCGCCAAGCTCGACTTCCACCGCCAGTTGTTCCGCGAGTTCGCCGAGAGCGCCCTCGAACCCTCGTCGAACGACCCGGGGCTCAAGGCGCTCGTCGCCTTCCTGGGCGACGACGCGGCCGTCGCGAAGGCCGTCGAGGAGATCCGCGGCAAGGCCGCCTCCAACGACATGGTGGCGTTCTGCTACATCGCTGGCGAGGATGCCGAGCGGATCCACGACCGGCCGGCCGTGCGAAGCGCCTGGAAGACGATGCGAGGTTCGGCCGGGAAGAAGGCCGAGGATCAACCATCCTGCATCGTCTGCGGCCGGGCGTCGGCCCCCGCCGAGAATCTGCCGCTCATCAAGAGGATCCCCGGCGGATCGACCGGGGGGATCGCCCTGGTGTCGGCCAACGCCGCCGCCTTCGAATCCTTCGGCCTCACGATCGACGACAGCGCCCCCATCTGTCAGCCCTGCGCCGACGCCTTCGGCAAGGGGATGAGCCGGCTGTTCCACCCGGAGTACACCGCCCCGGGCGGCGGGACGCTCCCTCGCCGGATGTTCCGCCTCTCCGAGGACACCGCCGCCGTCTACTGGTCGTCGGGGGCGAAGGAGCACCAGTTCGTGAACGAGTTCGGCGAAATCGACTACGCCGATGCCGAAAAGGCCGCGCCGTTCTTCGCCGCCGCTGCGAAGGGGAAGGATCTGCCCACGGACGATCCCACGCCGTTCTACGCCCTGATCGTCACGGGCGGTCAGGGGAGGGCGACGCTGCGTGGCTACTACCAGTCGACCGTGGGGGAGGTCGCGAGGCACGCCCGGCAGTACCTGGACGATATCCGGATCGTCCGCCGCTACCCGAATTCGCCCGAATATCCCGCCCTGTCGTGGCTGGTCCGCTCGCTCGCGGCGCAGGGCAAGTCGGAGAACGTCGACGCCGACCTCGCCGGCCGGCTGTTCCTGACGATCCTCGACGGCTCGCCATTCCCTCGCGAGGTCCTCGCCGCGGCCGTCCGCCGGATCCGCTCCGAGCGCGAGGACTCGCGCGGCGGCAAGCACTCGCGCGAACGCCTCGCCCTGATCCGCGCCACGCTGAACCGGTGGGTTCGGCGTGGCGACCCGCGAATCAAGCTCCCCATCCAGAAGGAGGTATCCGAAGTGCTCGACGTCGAATGCACGAACAACGCGTACTGCCTCGGCCGGCTGTTCGCCGCCCTGGAGAAGATCCAGGCCGATGCCATCGGCAAGCCCAACGCCACGATCACCGACCGCTTCTACGGCGCCGCGTCGGCCACGCCGGTCGTCGTCTTCGCCCCGCTGCTCCGCAAGGCGCAGCACCACGTCGCGAAGTTCGAGGAAGGGCTCCAGACCTATTGGGGCAAGACCATCCAGTCCATCCTCGCCCTCCTCAAGCCGGCCGATGCATTCCCATCGACGATGACGCTGGAGGAGCAGGGCCTCTTCGCCCTCGGCTACTACCACCAGCGGGCGGCGCTCTATCAGGGCAAGCCCGCGGAAAAGACCGCCGAGACCCCGGCCTCTGAGTGA
PROTEIN sequence
Length: 602
MILKELADLARRDGLLEDPDFEPKPVRWVVNLGRGGKFLNVTETMGTDAKGKPRPQVAQVPISRARTSGSVACFLVDKPEYALGYDPDDNPRKVAKLDFHRQLFREFAESALEPSSNDPGLKALVAFLGDDAAVAKAVEEIRGKAASNDMVAFCYIAGEDAERIHDRPAVRSAWKTMRGSAGKKAEDQPSCIVCGRASAPAENLPLIKRIPGGSTGGIALVSANAAAFESFGLTIDDSAPICQPCADAFGKGMSRLFHPEYTAPGGGTLPRRMFRLSEDTAAVYWSSGAKEHQFVNEFGEIDYADAEKAAPFFAAAAKGKDLPTDDPTPFYALIVTGGQGRATLRGYYQSTVGEVARHARQYLDDIRIVRRYPNSPEYPALSWLVRSLAAQGKSENVDADLAGRLFLTILDGSPFPREVLAAAVRRIRSEREDSRGGKHSRERLALIRATLNRWVRRGDPRIKLPIQKEVSEVLDVECTNNAYCLGRLFAALEKIQADAIGKPNATITDRFYGAASATPVVVFAPLLRKAQHHVAKFEEGLQTYWGKTIQSILALLKPADAFPSTMTLEEQGLFALGYYHQRAALYQGKPAEKTAETPASE*