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SCNpilot_cont_300_bf_scaffold_36_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 3991..4914

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Erwinia carotovora RepID=UPI0001A4462E similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 292.0
  • Bit_score: 168
  • Evalue 8.30e-39
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 305.0
  • Bit_score: 168
  • Evalue 4.50e-39
GntR family transcriptional regulator {ECO:0000313|EMBL:KFX12089.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora; subsp. carotovora).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 292.0
  • Bit_score: 168
  • Evalue 1.20e-38

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Taxonomy

Pectobacterium carotovorum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGGCGCGAAACTTTATGATCGCCTCAGCTTGAAGACCCTCAAGCTGGTGCTAGCAATCGAAAAATTTGGCTCGCTGACGCAAGCGGCCGAGGAATTGCACACGGCTGTATCGGCGGCGAGCCGGCGCATCCAATTCCTCGAAAGCAGTCTCGGTCATCAGGTTATCATTCGCACGGGACGCGGGATCACCCTCACGCCCTTTGGCCGTGTCGTCGCCAATTATGCGCGTCGAATCGCCGCCGACATTGATCAGCTCGAAGAAAATGTCCGCGATCTGGCGGTTGGGAATACGGAGAAAATCCGTCTCGCCGTGCCGGGGCCGGCGCTCTATCACGATTTGCCTGAGCAGCTCGATCATTATCTGCGCAGCTATCCCAGCGTAAGCCTGCTGTTGAAGGAAATGAAGAGCCAAGATGTGGTCGACAGTCTCCTGGGCGGCCAGGCCGATGTCGGTATCATCCTGTCCAACCATCTTTCGCCTGCGCTGGAGGTTCTGCCTTATCGCCGCGATCGGTTGAGCGTCATCGTCAATCCTTCCCATCCCTTGGCTAGCCAGTCATCCGTCAAATTTGAAACGTTGCTCGATGAGTCCTGGGTGTTGCCGCTCGAAACGGCCATTGGACAGACATTGGCGCAAGAAGCGGCGAAGCGGGGCGTTGATCTGTTGACGCGTGTCCATTCGCGCAGCCCGGCTTCCAGCTTGCGGATCGTTCACAGCGGTCTGGCGATTACCGTTCTGCCGCACGAAAGTTCGGCGGCGGAAATTTCGATGCGTGGCCTGGTAGCGATTTCGATTGCCGATGAATGGGCGCAGTTTGATCTGTGGCTTGCCACCCTGCGCACGACTAAATTATCGCCGGCTATCGGCGCTCTGATCAAGGCGCTGTCGGAGGAAGAGCCCACCGAGGCGCCAGAGCCGTAA
PROTEIN sequence
Length: 308
MGAKLYDRLSLKTLKLVLAIEKFGSLTQAAEELHTAVSAASRRIQFLESSLGHQVIIRTGRGITLTPFGRVVANYARRIAADIDQLEENVRDLAVGNTEKIRLAVPGPALYHDLPEQLDHYLRSYPSVSLLLKEMKSQDVVDSLLGGQADVGIILSNHLSPALEVLPYRRDRLSVIVNPSHPLASQSSVKFETLLDESWVLPLETAIGQTLAQEAAKRGVDLLTRVHSRSPASSLRIVHSGLAITVLPHESSAAEISMRGLVAISIADEWAQFDLWLATLRTTKLSPAIGALIKALSEEEPTEAPEP*