ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3195_curated_28

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(26676..28280)

Top 3 Functional Annotations

Value Algorithm Source
betA; choline dehydrogenase, a flavoprotein (EC:1.1.99.1); K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 532.0
  • Bit_score: 533
  • Evalue 7.00e-149
Choline dehydrogenase, a flavoprotein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 527.0
  • Bit_score: 579
  • Evalue 2.70e-162
Choline dehydrogenase, a flavoprotein {ECO:0000313|EMBL:EIT70807.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 527.0
  • Bit_score: 579
  • Evalue 3.80e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGACGACGGGAGGCGAGCTCCCCGACTACATCGTGGTCGGGGCGGGGTCGGCTGGTGCCGTTTTGGCGGCCAGACTGACGGAGGACCCTGAGGTCAGGGTGACGCTGGTCGAGGCCGGCGGCGAACAGAACAATCCCTGGATACACATTCCGCTCGGCTACGGAAAGCTGTTCCGCAACCCGACAGTCAACTGGATGTATTCCGGCGTGCCGGAGCCGGGACTGAATGACCGCGTCATCTACCACCCGCGCGGCAAGGTGCTGGGCGGATCGAGCGCCATCAACGGGCTTCTTTATGTCCGCGGGCAGCGCGAGGATTTCGATCACTGGGGCCAGCTGGGTTGCCGGGGTTGGGATTTCGACGGCGTGCTCCCCTATTTTCTGAAGGCCGAGCGGCGCATCGCCGGCGGCAACGCGTTGCGCGGCGGCGAAGGCCCGCAGCCGATTTCTCCGCCGACCATCGGCCACGAGTTGTGCGACGCCTATATAGCCGCCGGCCGGCAGTCCGGCTTGCCGCTCAACGACGATTTCAACGGCGCCTCGCAGGAAGGCACCGGCTACTATGAGTCCACGCATCTCAACGGCATCCGCTACAGCACGGCGACCAGCTATCTCAAGAAGGCGCGCAAGCGGTCGAACCTTCAGGTCCTGACCAAGGCGCTGGTCACGCGCGTCATCTTCGAAGGCAAGCGCGCTGTCGGCATCGCCTATGAACGCGATGGCCAGCGCCATGAGCTGCGTGCGCGCCGCGAGATTATCCTGAGCGCCGGGGCAATCGCCACGCCGCAGCTGCTGGAACTGTCGGGGATCGGCGATGCAGAACGGCTGAAAGGCCTAGGCGTGACGCCGGTGCATCATTCGCCCGCCATCGGCGAACGTTTTCAGGATCATCTGCAAATCCGGACCGTCTTCGAATCGAAGACCGACAACACGCTTAACGCCCGCTACAACAATATTTTCAGGCGTATCGGCATCGGCCTCGAATATCTGTTCAAGCGCCAGGGACCGCTGACCGTGTCGGCCGGCTATGCCGGTGCCTTCTATCGGACAGGCGACCATGTCGAGACGCCGGACATCCAGTCGCTCTTCCTGATTTTCTCGCTGCGCAAGATGGGCGACCGCTTCGATCCGTTCTCGGGCTTCACCGCCTCCTGCTATCAGTTGCGGCCGGAGAGCCGAGGCCATGTCCACGCGGTCTCGCCCGACATCCGCCAGCATCCTGCGATCTTCGCCAACTATCTGGCGACAGAGACCGACAGGCGGGTGAATATCGAGGGCCTGCGGAAGCTGCGCGACATGATGCGCCAACCTGCCATGGCCGCGCATGTCAAGCACGAGGTGGAGCCACCGCCCGGCACCGACAGCGACGAGGAGCTGCTTTCCTACATCCGGTCGACCGCATCCACCGTCTATCACCCGTCTTCAACCTGCGCGATGGGTCCGAACGAAGACGATCCCTGCGATCTGCAGCTCCGGCTGCGCGGTGTCGAGGGCCTCAGGGTCTGCGACGCTTCAGTCATGCCGGCCATGACATCGGGCAATCTCAACGCCGTCGCCATCATGATCGGCGAAAAGGGCGCCGATCTCATCAAACAGAATTCCTGA
PROTEIN sequence
Length: 535
MTTGGELPDYIVVGAGSAGAVLAARLTEDPEVRVTLVEAGGEQNNPWIHIPLGYGKLFRNPTVNWMYSGVPEPGLNDRVIYHPRGKVLGGSSAINGLLYVRGQREDFDHWGQLGCRGWDFDGVLPYFLKAERRIAGGNALRGGEGPQPISPPTIGHELCDAYIAAGRQSGLPLNDDFNGASQEGTGYYESTHLNGIRYSTATSYLKKARKRSNLQVLTKALVTRVIFEGKRAVGIAYERDGQRHELRARREIILSAGAIATPQLLELSGIGDAERLKGLGVTPVHHSPAIGERFQDHLQIRTVFESKTDNTLNARYNNIFRRIGIGLEYLFKRQGPLTVSAGYAGAFYRTGDHVETPDIQSLFLIFSLRKMGDRFDPFSGFTASCYQLRPESRGHVHAVSPDIRQHPAIFANYLATETDRRVNIEGLRKLRDMMRQPAMAAHVKHEVEPPPGTDSDEELLSYIRSTASTVYHPSSTCAMGPNEDDPCDLQLRLRGVEGLRVCDASVMPAMTSGNLNAVAIMIGEKGADLIKQNS*