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SCNpilot_expt_1000_bf_scaffold_1293_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 923..1699

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 252.0
  • Bit_score: 382
  • Evalue 5.60e-103
nth; endonuclease III; K10773 endonuclease III [EC:4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 251.0
  • Bit_score: 378
  • Evalue 2.40e-102
Endonuclease III n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSS4_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 251.0
  • Bit_score: 378
  • Evalue 7.60e-102

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGTTCATGAAAAATCCGAAGCCGCAATCCAGCACCCAAACCTTGAAAAAGTCAATTGCCGCACCGCGCCGCAAGCCGGCCTTGGCGAAGAGCGCCTATAGCAAGGCGGAGGTGGAGGAGATGTTCCGCCGCTTCTCGGTGCAGCGGCCGGAGCCGACCACCGAGCTGGAATATATCAATGCCTTTACCCTGCTGATCGCCGTGGTGCTCTCGGCGCAGGCGACCGATGCCGGCGTCAACAAGGCGACGCGCAAACTTTTCCAGATCGCCGACACGCCGGAGAAAATGCTGGCGCTCGGCGAAGACGGCGTGCGCGAGCATATCAAGACGGTCAACCTGTTCCGCAACAAGGCCAAGAACGTCATCGCGCTCTGTCGGCGGATGATCGACGAATTCGGCGGCGAGGTGCCGGGTAACCGCGAGGATCTGATGTCGCTGCCGGGCGTCGGGCGCAAGACGGCGAACGTCATGCTGACCACTTTCTTCGGCGAGATCGCGCTGGCGGTCGATACGCACATCTTCCGTATCGCCAACCGCATCCGACTCGCGCCCGGCAAGACGCCGGACGAGGTCGAGCAGAACCTGTTGCGCACCATCCCGAAACATTACCTGCGCCATGCCCATCACTGGCTGATCCTGCATGGCCGCTATGTCTGCAAGGCCCGTCGCCCGGAATGCGAGCATTGCATCATCGCCGATCTCTGCCGGGCGCCGGAAAAGACCTGCGACATCCCCGCGCCGCTGGTGGAACTGCCGTCCCAGCACGCTCCCGCCTGA
PROTEIN sequence
Length: 259
MFMKNPKPQSSTQTLKKSIAAPRRKPALAKSAYSKAEVEEMFRRFSVQRPEPTTELEYINAFTLLIAVVLSAQATDAGVNKATRKLFQIADTPEKMLALGEDGVREHIKTVNLFRNKAKNVIALCRRMIDEFGGEVPGNREDLMSLPGVGRKTANVMLTTFFGEIALAVDTHIFRIANRIRLAPGKTPDEVEQNLLRTIPKHYLRHAHHWLILHGRYVCKARRPECEHCIIADLCRAPEKTCDIPAPLVELPSQHAPA*