ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1293_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(22945..24903)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-glucose 4,6-dehydratase protein n=2 Tax=Rhizobium tropici RepID=L0LEA7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 643.0
  • Bit_score: 953
  • Evalue 8.40e-275
lpsB2; dTDP-glucose 4,6-dehydratase protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 643.0
  • Bit_score: 953
  • Evalue 2.70e-275
dTDP-glucose 4,6-dehydratase protein {ECO:0000313|EMBL:AGB69713.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 643.0
  • Bit_score: 953
  • Evalue 1.20e-274

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGCTGGCGGAAAAATATGCGGCGCCGTTCCTGGCCCTGCCGCGCTTCATCAAACGGCTTCTGGCGCTTGGCGTCGATGCGAGCCTGTGCGTCATCACGGTCTGGCTTGCTTATTGCTTCCGCCTCGATGGCTGGGTGGCGCTGTCGGGCATCGAATGGCTGCCGGTCGCCGTGTCGTTGATGCTGGCCTTGCCGATCTTCATCGTCATGGGGCTCTACCGCGCCATCTTCCGCTATGCCGGCTGGTCGGCCTTCATCACCGTCTTGAAGGCGGTGGCGATCTACGGGCTTCTGTTCGTGGCGCTGTTCACCGCCGTCAGCGTGCCGGGCGTGCCGCGCACCGTCGGCCTGCTGCAGCCGCTGCTTCTCCTGATCGCCATCGGCCTGTCGCGCCTGCTGACGCGTTATTGGTTGGGGGATGCCTATCACCGGCTCTTGCGCCGCAATTCCATGTCCAAGGTGCTGATCTATGGCGCGGGCAATGCCGGGCGCCAGCTCGCCGGCGCGCTCGCCAACAGCCTCGAACTCAAGGTCGCCGGTTATCTCGACGACGACGAGCGCCTGCAGGGCTCGATCATGGGCGGCCTGCCGATCTACGATCCGCGCGACCTCGCCGGCATCGCCGAGGCCTTCGGCATCAGCGACGTGCTGCTCGCCATTCCCTCCGCCGACCGCAGGCGCCGCAACGCCATCCTCGAAAGCATCCGCAAGGCCAAGGTCAATGTCCGCACTTTGCCGGATCTGACGGCGATCGCCACCGGCCGTGTCGCCGTCTCCACGCTGCGAGAACTCGATATCGAGGATCTGCTCGGCCGCAATGCCGTCGAGCCCGAGCGCGACCTGCTGGAGCGCAACATTCGCGGCCGCGTGGTGATGGTGACCGGCGCGGGCGGTTCGATCGGCAGCGAACTGTGCCGCCAGATCCTCAAATGCGGACCCTCGACCCTGCTGCTGGTCGAGCAGAGCGAATTCGCGCTCTATGAAATCCTTTCGGAACTGACCAAGCTGCGCGACCATGCCGGCGCGTCGGATATCCAGATCATTCCCTTCATCGCCACGGTGCGCGACGCCCAGCGCCTGCGCCACATCATGGCCAGTTGGCGGCCGGAGACGATCTATCATGCCGCGGCCTACAAGCATGTGCCGCTGGTCGAATACAATCCGGCCGAGGGCATCCGCAACAACGTGCTCGGCACGCTGACCGCCGCGACCGTGGCGCGCGAGGCGGGGGTGAAGAATTTCGTGCTGATCAGCACCGACAAGGCGGTGCGCCCGACCAATATCATGGGCGCCAGCAAGCGGCTGGCGGAGATGGTACTGCAGGCGCTTGCCGCCCAAGGCGCAGCCAGTGGCGAACCTGCGACCAACTTCTCCATGGTGCGCTTCGGCAATGTGCTCGGCTCCTCCGGCTCGGTGGTGCCGCTGTTTCGCCAGCAGGTGCGCGACGGCGGGCCGGTGACGCTGACCCATCCCGACATCACCCGCTATTTCATGACCATCCCCGAGGCCTCGCAGCTCGTCATCCAGGCCGGCGCCATGTCGCAGGGCGGCGATCTCTTCATCCTCGACATGGGCCAGCCGGTGAAGATCATCGATCTCGCCCGGCGCATCATCGAGCTCTCGGGCTATTCGGTGCGCGACGACGACAATCCCGATGGGGATATCGAGCTGGCGGTCATGGGCCTGCGTCCCGGCGAAAAACTCTACGAGGAATTGCTGATCGGCGACAATCCGATGCCGACCCAGCATCCGCGCATCATGAAGGCGCGCGAGGACTTTCTGCCGTGGCCGGAGCTTGAAGCAAAACTGGCGGAACTGGACGAGATCCTCGACCGCAACGACATCGTCGAGGCGCGCGCCTTCCTGCAGACCCTCGTTTCCGGCTACAAGCCGACCGGCGAGGTCGTTGATCTCATCAATGCCGAACGGGCGTCGGCGCCTTCGGAACATGCGGCCTGA
PROTEIN sequence
Length: 653
MLAEKYAAPFLALPRFIKRLLALGVDASLCVITVWLAYCFRLDGWVALSGIEWLPVAVSLMLALPIFIVMGLYRAIFRYAGWSAFITVLKAVAIYGLLFVALFTAVSVPGVPRTVGLLQPLLLLIAIGLSRLLTRYWLGDAYHRLLRRNSMSKVLIYGAGNAGRQLAGALANSLELKVAGYLDDDERLQGSIMGGLPIYDPRDLAGIAEAFGISDVLLAIPSADRRRRNAILESIRKAKVNVRTLPDLTAIATGRVAVSTLRELDIEDLLGRNAVEPERDLLERNIRGRVVMVTGAGGSIGSELCRQILKCGPSTLLLVEQSEFALYEILSELTKLRDHAGASDIQIIPFIATVRDAQRLRHIMASWRPETIYHAAAYKHVPLVEYNPAEGIRNNVLGTLTAATVAREAGVKNFVLISTDKAVRPTNIMGASKRLAEMVLQALAAQGAASGEPATNFSMVRFGNVLGSSGSVVPLFRQQVRDGGPVTLTHPDITRYFMTIPEASQLVIQAGAMSQGGDLFILDMGQPVKIIDLARRIIELSGYSVRDDDNPDGDIELAVMGLRPGEKLYEELLIGDNPMPTQHPRIMKAREDFLPWPELEAKLAELDEILDRNDIVEARAFLQTLVSGYKPTGEVVDLINAERASAPSEHAA*