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SCNpilot_expt_1000_bf_scaffold_6728_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 627..1577

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMG7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 316.0
  • Bit_score: 571
  • Evalue 5.70e-160
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77784.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 316.0
  • Bit_score: 571
  • Evalue 8.00e-160
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 316.0
  • Bit_score: 542
  • Evalue 6.80e-152

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAGCGACACTTCTTCACCCCATGACGCAATCGGGACGGCCAGGCGGCCGATACGCTGGCATATCGCCGTTTTCCTCATGCCGGCCTTCGTCATCTACTCGGCGATCATGATCCTGCCGCTGATCGAGACGCTGCGCCTGTCGCTGTACAACACGGTCGACGGCCAGTCGATCTTCGTGGGCCTGAGCAATTTCAAGACGCTGTTCGGCGACGAGCGCTGGGCGGCGAGCTTCTGGAACGCGCTGCGCAACAACCTCGTCTTCTTCGTCATCCACATGCTGGTGCAGAACCCGATCGGCGTGGCGCTGGCGGCGATGCTGTCGCTGCCGCGGCTGCGCTTCGTCACCTTCTACCGCACAGCGATCTTCATGCCGACGCTGCTCTCCTTCGTGATCGTCGGCTTCATCTGGAAGCTGATCCTGTCGCCGCTGTGGGGCGTCGCGCCGTGGATGTTGGATCTGGTCGGGCTGAAATCGCTGTTCGGCCCCTGGCTCGGCCAGCCGGGCTCGGCGCTGATCGCGGTGTCGCTGATCTCGGTCTGGCAATATGTCGGCATCCCGATGATCCTGATCTATGCCGCGCTGCTCAACATCCCGGACGAGGTGATCGAGGCGGCCGAATGCGACGGCATCACCGGCTGGAGCCAGTTCTGGAAGATCAAGCTGCCGCTCATCCTGCCCGCCATCGGCATCATTTCGATCCTGACCTTCGTCGGCAATTTCAATGCCTTCGACCTGGTCTACACCGTGCAAGGGGCGCTTGCCGGCCCGGACGGCTCGACGGACATCCTCGGCACGCTGCTCTACCGCACCTTCTTCGGCTTCCAGCTGCAGCTCGGCGACCGCTCCATGGGCGCGACCATCGCCACGGTGATGTTCCTGATCATTCTCGCCGGCGTCTCGTTCTACCTGTTCGCCATCCAGCGCCGCATGCGCCGCTACCAGTTCTGA
PROTEIN sequence
Length: 317
MSDTSSPHDAIGTARRPIRWHIAVFLMPAFVIYSAIMILPLIETLRLSLYNTVDGQSIFVGLSNFKTLFGDERWAASFWNALRNNLVFFVIHMLVQNPIGVALAAMLSLPRLRFVTFYRTAIFMPTLLSFVIVGFIWKLILSPLWGVAPWMLDLVGLKSLFGPWLGQPGSALIAVSLISVWQYVGIPMILIYAALLNIPDEVIEAAECDGITGWSQFWKIKLPLILPAIGIISILTFVGNFNAFDLVYTVQGALAGPDGSTDILGTLLYRTFFGFQLQLGDRSMGATIATVMFLIILAGVSFYLFAIQRRMRRYQF*