ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6728_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(9686..10888)

Top 3 Functional Annotations

Value Algorithm Source
Cystathionine gamma-synthase MetB {ECO:0000313|EMBL:EYR83015.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EYR83015.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 400.0
  • Bit_score: 762
  • Evalue 2.40e-217
cystathionine gamma-synthase (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11] similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 400.0
  • Bit_score: 745
  • Evalue 8.80e-213
Cystathionine gamma-synthase MetB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BZX3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 400.0
  • Bit_score: 762
  • Evalue 1.70e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTCTTCCAAAGACTACGAATTCGCCAGCCGCGCCGTGTTCTACGAGGCGGAAGAACATTCCCAGTCGATCAGCTACCCGATCTACATGTCGGCCAACTTCCAGTATGCCGGCGATATCTACGACCAGATCGTGGCCGGCGCCCGCAAGGAAGTGAACATCTATTCGCGCTGCGGCAACCCGACCGAATACAAGCTGGAAGAACACATCGCCCAGTTGACCGGCGGCACCGCCTGCCTCGCCACCGCCTCCGGCATGGCGGCGATCTCGCATGCGCTGTTCGGCATCCTCAAGGCCGGCGACCATGTCGTTGCCGATCTCACCACCTATTCCTCGACGCATGAATTCTTCGACCACCGCGCCCAGGATTTCGGCCTGAAGGTCAGCCTCGTCGACTGCACCGACGTGCGCGCCGTCGAAAACGCCTTCACCGACGAGACCAAGGTTCTTTATGTCGAGGCCATCGCCAACCCGACGATGAAGGTGCCGCCGCTGAAGAAGCTGGTCGAGATCGCGCATGCGCGCGGCATCGTCGTCATCTGCGACAACACCTTTGCCTCGCCGGCCGTCTGCCGCCCGCATGAATTCGGCGTCGACGTCGTCGTCGAAAGCGCCACCAAGTTCATCGGCGGCCATAACGATGCCGTCGGCGGCGTCATCACGCTGAAATCCGACATCCTGCCGGCCGACTGGCTGGAGGATGTGCGCTGGAACACGCTGAACAAGCTCGGCGCGCCGCTCTCGCCCTTCAATGCCTGGCTGCTGCTGCGCGGCGCCCAGACGCTGGCGCTGCGCCTCGAAAAGCAGTGCGCCAACGCCTTGGCGCTCGCCAAGCACCTTGAAAGCCATCCGAAGGTCAAGCGCGTCTTCTATCCCGGCCTGCCCTCGCACCCGAACTATGAGTCGGCCAGCGAGCAACTGAAGGGCGGCGGCGCGATGCTGTCCTTCCAGGTTGTCGACGAACCCTCGGGCGCGCGCCTGCTCAAGCGGCTGAAGCTGTGCTGCTTCGCCGCCAGCCTCGGCGGCTTGCGCACCACGACGCAGGTTCCGGCAACCATGGCCTTCCTCGATATTCCGAGCCAGGAGCGTGAAGCGATGGGCGTGGTCGACGGCCTCGTGCGTTTCTCGGTCGGCATCGAGCATATCGACGACATCATCGCCGACGTCGATCAGGCCATCGACCAGATGCATATCGAGTTCTGA
PROTEIN sequence
Length: 401
MSSKDYEFASRAVFYEAEEHSQSISYPIYMSANFQYAGDIYDQIVAGARKEVNIYSRCGNPTEYKLEEHIAQLTGGTACLATASGMAAISHALFGILKAGDHVVADLTTYSSTHEFFDHRAQDFGLKVSLVDCTDVRAVENAFTDETKVLYVEAIANPTMKVPPLKKLVEIAHARGIVVICDNTFASPAVCRPHEFGVDVVVESATKFIGGHNDAVGGVITLKSDILPADWLEDVRWNTLNKLGAPLSPFNAWLLLRGAQTLALRLEKQCANALALAKHLESHPKVKRVFYPGLPSHPNYESASEQLKGGGAMLSFQVVDEPSGARLLKRLKLCCFAASLGGLRTTTQVPATMAFLDIPSQEREAMGVVDGLVRFSVGIEHIDDIIADVDQAIDQMHIEF*