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SCNpilot_expt_1000_bf_scaffold_6728_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 14160..14927

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EI13_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 255.0
  • Bit_score: 445
  • Evalue 5.00e-122
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR83019.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 255.0
  • Bit_score: 445
  • Evalue 7.00e-122
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 255.0
  • Bit_score: 418
  • Evalue 1.20e-114

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
GTGGCGCTGTGGGTGCTGGAAAATGTCGACGCCACCATCCGCAATTCCATGTCGGCCATCGCCCAGGCCGTCGATGTCAGCGATACGACCGTGCTGCGCATGTGTCGCACCGCCGGCTTCGAGGGCTTCACCGACCTCAAGCTGGCGCTGGCGCAGGAGCCGCGCGAGGCCCGCGACGACACCTCCAGCGAAACCCATGCCAGCGACCTGCAGGCCGCCGGCCGGCTGTTCCGCGCCGTATCGCAGGCGATCAGCGATACGCAAGGGGTGCTGAACGAGGCGGGTTTCGCCAGGGCGCTCGACCTGATCGCCGGGGCCCGCCACATCCTCGTCGGCGGCGTCGGCGGCTCGGGGATCGTCGCGCAGGCCTTCTACCAGCGCTGCATTCGCCTGGGCCAACGCTGCGACGCGCCGATCGACTCGCAGCTGCAGATCATGCATGCGGCGCTGACCGGCCCCGAAGATCTCGTCGTCGTCATCTCCTATTCCGGCATTACCAGCGATCCCGTGCTCATCCTTCAGGAGGCAAAATCCCGAGGGGCGGCGACGCTATGTATCACCGGCAACAGCGCCTCGCCGCTCGCGCGGCTTGCCGATGTCGTGCTGGTCAGCGTCTCGCACGAGCAGGGCAGCGAGCCGATGGCGGCGCAGATCGCCCAGATGACCCTCGTCGACGCCCTCTATTCGGCGCTCGTCGCGCGCAATGCCGAGCAGGCCCAACTGACCGAAGAACGGATGGTCAACGCCATCCTGCCCAAATCGATCTAA
PROTEIN sequence
Length: 256
VALWVLENVDATIRNSMSAIAQAVDVSDTTVLRMCRTAGFEGFTDLKLALAQEPREARDDTSSETHASDLQAAGRLFRAVSQAISDTQGVLNEAGFARALDLIAGARHILVGGVGGSGIVAQAFYQRCIRLGQRCDAPIDSQLQIMHAALTGPEDLVVVISYSGITSDPVLILQEAKSRGAATLCITGNSASPLARLADVVLVSVSHEQGSEPMAAQIAQMTLVDALYSALVARNAEQAQLTEERMVNAILPKSI*