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SCNpilot_expt_1000_bf_scaffold_6728_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15911..18313)

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase E1 component AceE {ECO:0000313|EMBL:EYR83865.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EYR83865.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 790.0
  • Bit_score: 1451
  • Evalue 0.0
pyruvate dehydrogenase E1 component-like protein; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 792.0
  • Bit_score: 1187
  • Evalue 0.0
Pyruvate dehydrogenase E1 component AceE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW01_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 790.0
  • Bit_score: 1451
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2403
ATGACTGCGCCGGCCTTGACGCCAGCTCGGCTGGCATGCCTGAAGGATCTGGAAAAACAGGTTCTGTGGCATGCCTGCTGGATGATCCACAACGCCAACCATCTGCGCGAAAAGGGCGAGGTAAAGGTCGGGGGCCATCAGGCCTCATCCGCATCGCTCGCCTCGATCATGACGGCGCTGTATTTCCATGTGCTCCGGCCGGAAGATCGCGTCGCGGTCAAGCCGCATGCCTCGCCGGTCTTCCACGGCATCCAGTACCTGATGGGCAATCAGACCCGCGAGAAGCTGGAGAATTTCCGCGGTTTCGGTGGCGCGCAGTCCTATCCGAGCCGCACCAAGGATATCGACGACGTCGATTTCTCCACCGGTTCGGTCGGTCTCGGCGTGGCGATCACCGCCTTCGCCTCCATCGTGCAGGATTACATCGCCGCCAAGCAATGGTCGAAGAAGCAGCCCACCGGTCGCATGATCGCGCTGGTCGGCGATGCCGAGCTTGACGAAGGCAATATCTACGAATGCCTGCAGGAAGGCTGGAAGCGCGGCCTGCGCAACACCTGGTGGGTGATCGACTATAACCGCCAGAGCCTCGACGGCGTCATCCGCGAAGGCCTGTGGCAGCGCATCGAGGGCATATTCACCGCCTTCGGCTGGGATGTGAAGGTGCTGAAATACGGCGCGCTGCAGGAAGCCGCCTTCAAGGAGCCCGGCGGCGAGGCGCTGCGCGGCTGGATCGACCGGTGTCCGAACCAGCTTTATTCCGCCCTCACCTTCCAGGGCGGTGCGGCCTGGCGCAAGCGCCTGACCGACGATATCGGCAGCGAGCCGGGTGTCGCAGCACTTCTCGCCTCGCGCAGCGACGAGCAGCTCTCCGACCTCATGAACAATCTCGGCGGCCATTGCCTGGAAACGCTGGTCCGCACCTTCGAGAGCATCGATCACGACCGGCCGACCGTCTTCCTCGCCTATACGATCAAGGGCTGGGGCACGCCGCTGGCCGGCCACAAGGACAACCATGCCGGCCTGATGACCAAGGCGCAGATGGAGACCTTCCAGACCCGCATCGGCGTCAGGCCGGGCGAGGAATGGGAAAAATTCGGCGCCATCCCCTCGCCCCAGCCGGCGCGCGAATTCCTCAAGACGGTGCCCTTCTTCGCCGAAGGCCCGCGCCGCTTCAAGTCTCCCGCCCTGCCCGCCTCCGGCCCGGTCTTCCTCGAAGACCGCGAATTGTCGACGCAGGCCGGTTTCGGCAAGATCCTCGATGCATTGGCCCAGCGCGACGACGCCCTGTCGCAGCGCATCGTCACCACGGCGCCTGACGTCACGGTCTCGACCAATCTCGGTCCCTGGGTCAATCGCCGCGGCCTTTTCGCCCGCGACAAACAAGCGGATACGTTCCGCGATGAGCGGGTGCCTTCGGTGCAGAAATGGGAATTCGGCCCGGCCGGCCAGCATATCGAGCTGGGCATTGCCGAAATGAACCTGTTCCTGCTGCTGGGCGCTGCCGGCCTCTCGCATTCGCTGTTCGGCGAGCGGCTGCTACCGATCGGCACGGTCTACGATCCCTTCGTGGCCCGTGGCCTCGATGCCCTGAACTATGCCTGCTACCAGGATGCCCGCTTCATGATCGTCGGCACGCCCTCCGGCGTGACGCTGGCCCCGGAAGGCGGCGCGCATCAGTCGATCGGCTCGCAGCTCATCGGCATGAGCCAGGACGGTCTTGCCAGCTTCGAGCCGGCCTATCTCGACGAATTGTCGGTGATCATGGACTGGTCCTTCGACTATATGCAGCGCGACGGCGATGGCGGCCATGACACCCGCACCTGGCTGCGCGACGAGACCGGCGGCTCGGTCTATCTGCGCCTGACGACGCGGCCCTTGGAGCAGATTGCGCTGCGCCGCGAGGATCCGGCCTTCCGCCAGGGCGTCATCGACGGCGCCTACTGGCTGCGCGCGCCGTCCGCCCGCACCCGCATCGTGCTCGCCTATCAGGGCTGCATCGCGCCGGAAGTGCTGATGGCGGCAGGCCGCATGGCCGAAGCGCATGGCGATATCGCCGTGCTGGCCGTCACCTCCGCCGACCGGCTGAACGCCGGCTGGACGGCGGCGCAACGCGCCCGCCGCCACGGGGAGATCAATGCCCGCAGCCATATCGAAACGCTGTTCGACAGCGTGTCGCGCGCCGCCAGCCTGATCACCGTCACCGACGGCCATCCGGCGACGCTCGGCTGGCTGGGTTCGGTGCAGGGCCACCGCACGGTGTCGCTCGGCGTCGAGCATTTCGGCCAGACCGGCACTATCGCCGACCTCTACGCCCATTTCGGCATCGACACCCATGCCATCATGGAAGCGGCGGACTCGATTGCGCGCGCCGAGGCCCAACCATTGCGGGCAAATGCCGGCTGA
PROTEIN sequence
Length: 801
MTAPALTPARLACLKDLEKQVLWHACWMIHNANHLREKGEVKVGGHQASSASLASIMTALYFHVLRPEDRVAVKPHASPVFHGIQYLMGNQTREKLENFRGFGGAQSYPSRTKDIDDVDFSTGSVGLGVAITAFASIVQDYIAAKQWSKKQPTGRMIALVGDAELDEGNIYECLQEGWKRGLRNTWWVIDYNRQSLDGVIREGLWQRIEGIFTAFGWDVKVLKYGALQEAAFKEPGGEALRGWIDRCPNQLYSALTFQGGAAWRKRLTDDIGSEPGVAALLASRSDEQLSDLMNNLGGHCLETLVRTFESIDHDRPTVFLAYTIKGWGTPLAGHKDNHAGLMTKAQMETFQTRIGVRPGEEWEKFGAIPSPQPAREFLKTVPFFAEGPRRFKSPALPASGPVFLEDRELSTQAGFGKILDALAQRDDALSQRIVTTAPDVTVSTNLGPWVNRRGLFARDKQADTFRDERVPSVQKWEFGPAGQHIELGIAEMNLFLLLGAAGLSHSLFGERLLPIGTVYDPFVARGLDALNYACYQDARFMIVGTPSGVTLAPEGGAHQSIGSQLIGMSQDGLASFEPAYLDELSVIMDWSFDYMQRDGDGGHDTRTWLRDETGGSVYLRLTTRPLEQIALRREDPAFRQGVIDGAYWLRAPSARTRIVLAYQGCIAPEVLMAAGRMAEAHGDIAVLAVTSADRLNAGWTAAQRARRHGEINARSHIETLFDSVSRAASLITVTDGHPATLGWLGSVQGHRTVSLGVEHFGQTGTIADLYAHFGIDTHAIMEAADSIARAEAQPLRANAG*