ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1475_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7102..7818)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator NanR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU49_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 1.40e-97
transcriptional regulator NanR similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 4.30e-98
Transcriptional regulator NanR {ECO:0000313|EMBL:AGB74767.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 1.90e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCGATCCGAACCCATCACCCGCCGCAAACTCTCCGACGAGGTGTTCGACCGCCTCGAACGCATGATCTCCTCGGGTGAGCTGACGCCCGGCGACGACATGCCTTCCGAGCGCGAGCTGATGGACCGCTTCAAGGTCGGCCGGCCCGCCATCCGCGAAGCGATGCAGTCGCTGGAGCGCATGGGGCTGGTGGCGATCTCGCATGGCGAGCGCGCCAAGGTTCTGGAGCTGACCGCCAAATCCCTGTTCCGGCAGATGGACCTGACCGCAAAGATCATGCTCGCCAAATCGGCCGATACGCTGGAGCATCTGAAAAGCGCGCGCATCTTCTTCGAGCGCGGCATGGCCCGCGAGGCGGCGCAAAAAGCATCGCCTGAGGATATCGCCGCCCTGCATGCCATCCTCGACCGCCAGCGCGCCTCGCTCGGCAATGCCGAAGCCTTCATCGCCGCCGACATGGCGTTTCATACCCGCATCGCCGAGATTTCCGGCAATCCGATCTTCGCGGCGGTCAGCGAATCCATGCTCGCCTGGCTGCAGGAATACCATACCGACATGCTGATCTGGACCGGAAAGGAGCGGTTTACGCTGGCCGAACATGAGGAGATCGTCGACCGTCTTGCCGCCGGCGACGCAGACGGCGCCGAGCAGGCGATGCTCAAGCATCTGGAACGCTCGCGCGCCCTCTATACGCTGCCGCGCGGCGACGACGCCTGA
PROTEIN sequence
Length: 239
MRSEPITRRKLSDEVFDRLERMISSGELTPGDDMPSERELMDRFKVGRPAIREAMQSLERMGLVAISHGERAKVLELTAKSLFRQMDLTAKIMLAKSADTLEHLKSARIFFERGMAREAAQKASPEDIAALHAILDRQRASLGNAEAFIAADMAFHTRIAEISGNPIFAAVSESMLAWLQEYHTDMLIWTGKERFTLAEHEEIVDRLAAGDADGAEQAMLKHLERSRALYTLPRGDDA*