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SCNpilot_expt_1000_bf_scaffold_1475_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19093..20319)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT77_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 417.0
  • Bit_score: 653
  • Evalue 1.10e-184
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX82979.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 417.0
  • Bit_score: 653
  • Evalue 1.60e-184
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 417.0
  • Bit_score: 649
  • Evalue 8.70e-184
  • rbh

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGAAGACATTGCTTCTGACACTGACATCGGCGCTGGCGTTAAGCGCCGCCGCCGCCAATGCCGCCGACTGCAAGATCACCGTCGGCGTCGTCATGGAACTGACGGGGCCGGCCGGCGAATACGGCCAGGCGGGCGCAAAATCCGTCGACATGGCCTTCCGCGACCTCAACGAGGNNNNNNNNNNCGACAGCCAGAGCCAGGGCAACGTCGCCGTCGATGCCGCCACCCAGCTCGTGCAGGTCGGCAAGGTGCCGGTGGTGATCGGCGGCATCATCTCCTCGGTGTCGATCCCGATCCTCACTTCGGTGACCGCACCGGCCAAGGTGGTGCAGGTTTCGCCCGCCTCCTCCTCGCCGACGCTGACGGCGCTCGGCCGCGAAGGCAAGACCAACGGCATCTTCTTCCTCACCATCACCTCGGATGCGCTGCAGGGCGTGGCCGCTGCGAAATATGCCCTCGACCAGGGTTTCAAGAAGCTCGCCGTCATCCATGTCAACAACGACTTCGGCGTCAACATGGTCAACGAGTTCTCCCGCGCCTACAAGGCGCTGGGCGGCGAGATCGTCTCGGTGACGCCCTATAACGAGAAGCAGTCGAGCTACCAGTCGGAAGTCACCAAGGCGATGGAAGGCGAGCCGGATGGCCTCTACCTCATCTCCTATCCGGTCGACGGCGCCACCATCGCGCGCGCCTGGATCTCGCAGGGCGGCGTGCAGAAATTCCTGCTCAACGACGGCATGAACAGCATGGATTTCATCACCGCCGTCGGCGCGGAATATCTGAACGAAGCCTATGGCACCTCGTCCGGCACCAGCCCGACCAAGTCGACCGAATATTTCAACGCCAATTACAAGGCCTTCTCCAATATCGAGCCCTCCAACCCGGCCGCCGACCGCTCCTATGATGCCGGCGCCATCGTCGGTCTCGCCATCGCCGCTGCCGGTTCGGACAAATCGGCCGATATCCGCGAGGCGATCTACAAGGTCGTCGATCCCAAGGGCGAGCCGATCTATGCCGGCAAGGAAGAATTCGCCAAGGCGCTGAAGCTGATTGGCGAAGGCAAGCCGATCCGCTACGAAGGCGTCATCGGCCCCGTCGCCTTCGACAAATACGGCGACATCACCGGCCCCTTCCGCCTGTGGAAGATCAAGGACGGCGAAGTCACCACCGTCGGCGAAATGAGCACCGACGATGTCGGCAAGCTGAAGGCCGAGACGGACAAGTGA
PROTEIN sequence
Length: 409
MKTLLLTLTSALALSAAAANAADCKITVGVVMELTGPAGEYGQAGAKSVDMAFRDLNEXXXXDSQSQGNVAVDAATQLVQVGKVPVVIGGIISSVSIPILTSVTAPAKVVQVSPASSSPTLTALGREGKTNGIFFLTITSDALQGVAAAKYALDQGFKKLAVIHVNNDFGVNMVNEFSRAYKALGGEIVSVTPYNEKQSSYQSEVTKAMEGEPDGLYLISYPVDGATIARAWISQGGVQKFLLNDGMNSMDFITAVGAEYLNEAYGTSSGTSPTKSTEYFNANYKAFSNIEPSNPAADRSYDAGAIVGLAIAAAGSDKSADIREAIYKVVDPKGEPIYAGKEEFAKALKLIGEGKPIRYEGVIGPVAFDKYGDITGPFRLWKIKDGEVTTVGEMSTDDVGKLKAETDK*