ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1280_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5091..5618)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5H9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 179.0
  • Bit_score: 303
  • Evalue 1.20e-79
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 179.0
  • Bit_score: 303
  • Evalue 1.70e-79
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 174.0
  • Bit_score: 291
  • Evalue 2.00e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAACATCATTCAGCAGCTCGAGGCCGAACAGGCCGCCAAGATCGAAGCCCAGCGCAAGCTTCCGGAATTCTCCGCCGGCGATACGCTCCGCGTCAACGTCAAGGTCGTCGAAGGCACCCGTACCCGCGTTCAGGCCTATGAAGGCGTCTGCATCGCCCGTTCCGGCGGCGGCATCAACGAGAGCTTCACCGTTCGCAAGATCTCCTACGGCGAAGGCGTCGAGCGCGTATTCCCGATCTACTCGCCGCTCGTCGAAAGCGTCGAAGTCGTTCGTCGCGGCAAGGTCCGTCGCGCCAAGCTGTACTACCTGCGCGACCGTCGCGGCAAGTCGGCCCGTATCGTTGAAGACACCGGCGTTCGCGCCCGCAAGCTCAACGATGCCGAGCGCGCCGCTGCTGCCCAGGAAAAGGCTCGCCTCGAAGCCGAGAAGGTTGCCGCCGCACAGGCTCTGGCCGCTGAAAAGGCCGCAGCCGAAGCAGCCGCTGCGGAAGCTGCTGCTGCCGCAGAAGCCGCCAAGAGCGAATAA
PROTEIN sequence
Length: 176
MNIIQQLEAEQAAKIEAQRKLPEFSAGDTLRVNVKVVEGTRTRVQAYEGVCIARSGGGINESFTVRKISYGEGVERVFPIYSPLVESVEVVRRGKVRRAKLYYLRDRRGKSARIVEDTGVRARKLNDAERAAAAQEKARLEAEKVAAAQALAAEKAAAEAAAAEAAAAAEAAKSE*