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SCNpilot_cont_300_bf_scaffold_2495_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_5

partial RP 39 / 55 BSCG 35 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 15395..16498

Top 3 Functional Annotations

Value Algorithm Source
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS12_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 372.0
  • Bit_score: 494
  • Evalue 1.00e-136
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 372.0
  • Bit_score: 494
  • Evalue 3.20e-137
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ACS19963.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 372.0
  • Bit_score: 494
  • Evalue 1.40e-136

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAGAAAAGTCTCACTGCTGGCGGCAAGCGCCGTCCTGGCCATCATGGCCGCAAGCGGCGCGCGCGCCGACGACTTCATGGATCAGGCCAAGGCGCGCGTCGCCGCCGCCGTCCAGCGCGCGGGCGCCTGGGACGGTCCGACGACCGGCCCGAAGGCGGCACCGGGCAAGACGATCGTCTATGTCGCGGGTGACCTCCGCAATGGCGGCACTTCGGGCGTGTCCGAGGGCGTCAAGGAAGCGGCGAAGGCGATCGGCTGGAACCTGCAGATCATCGACGGCCAGGGCCAGGTCTCGACCCGCACCTCGGCGCTGAACCAGGCGATCGCGCTGAAGCCCGACGGCATCATCGTGTCGGGCTTCGACGCGATCGAGCAGAACGCCGCCCTCGCCTCGGTCAAGGAAGCCGGCATTCCCTTCGTCGGCTGGCATGCGACGATCGAGCCCGGACCGGATCCGGCGACGGGCATGTTCGCCAATGTGAACACGCGCATCCTCGATGTCGCCAACACGGCCGCCGACCTCGCCATCGTCGATTCCGGCGGCAAGGCCGGCGTCGTGATCTTCGGCGATTCCAACTACGCCATGGCCATCGGCAAAGCGAAGATGATGGAGGCCGAGATCAAGAAATGCGCGACCTGCGAGGTGCTGAGCCTCGAGGATTCGCCGATGACCGAGGCCTCGATGCGCATGCCGCAGCTGACGACCTCGCTGCTGCAGCGCTTCGGCGACAAGTGGACCTATTCGCTGGCCGTGAACGACCTCTATTACGACTTCATGGGCCCCTCGCTCGCCAGCGCCGGCAAGGACGGCGACGGCACGCCGAAGAACATCTCGGCCGGCGACGGCTCGGAATCGGCGTTCCAGCGCATCCGCTCCAAGCAGTACCAGCTCGCCACCGTTCCGGAGCCGCTGCACCAGCAGGGCTGGCAGATCATCGACGAGCTGAACCGCGCCCTCGCCAAGGAGCCCTGGTCCGGCTACGTCTCGGGCATCCACATCGTGACGGCCGACAACATCGCCTTTGACGGCGGCCCGAACAATGTGTTCGACCCCGACAATGGCTATCGCGACGTCTACAAGAAGATCTGGGGCGTGCAGTAG
PROTEIN sequence
Length: 368
MRKVSLLAASAVLAIMAASGARADDFMDQAKARVAAAVQRAGAWDGPTTGPKAAPGKTIVYVAGDLRNGGTSGVSEGVKEAAKAIGWNLQIIDGQGQVSTRTSALNQAIALKPDGIIVSGFDAIEQNAALASVKEAGIPFVGWHATIEPGPDPATGMFANVNTRILDVANTAADLAIVDSGGKAGVVIFGDSNYAMAIGKAKMMEAEIKKCATCEVLSLEDSPMTEASMRMPQLTTSLLQRFGDKWTYSLAVNDLYYDFMGPSLASAGKDGDGTPKNISAGDGSESAFQRIRSKQYQLATVPEPLHQQGWQIIDELNRALAKEPWSGYVSGIHIVTADNIAFDGGPNNVFDPDNGYRDVYKKIWGVQ*