ggKbase home page

SCNpilot_expt_1000_bf_scaffold_848_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 10666..11853

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FI00_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 401.0
  • Bit_score: 469
  • Evalue 3.80e-129
Type VI secretion protein {ECO:0000313|EMBL:ESX71559.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 401.0
  • Bit_score: 469
  • Evalue 5.40e-129
hypothetical protein; K11902 type VI secretion system protein ImpA similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 395.0
  • Bit_score: 452
  • Evalue 1.50e-124
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
GTGATCGATCTCGCTCCGTGGCTTCGACCGCTCGACGGTGAAAATCCGTCCGGAGAGGATTTGCGCAACGATACCCGGTTCCACGATCTGCTGAGGCTGATCGAGCCCCAGGTGAGCGTCGTCTACGACGACCGCAACCGCCCGGTCTCGCAGGCCACCACGCCCCCGGACTGGGAGGCGGTGCTCACCAAGGCGGAGGAGCTGCGCGAGCAGGGACGCGACCTGCGGCTGCTTTTGATCGTCACCCGCGCCCTTTCGAGCCAGGACGGGCTTGCCGGCCTCGCCCAGGGGCTCGAGCTCATCGCCAGGTCGCTCGACGAGTTCTGGGACAACCTGCATCCGGCCCTGCGCGGCGGCGCGCCGCGCGAGGCGGCGCTGCGCCGGATCAACGCGCTGCTCGACCTGCAGAACGCGCAGACGGGCGTGCTCGCCGACCTGAGGCAGATGGCCTTCTTCAACTCGCCCGGCCTCGGCCCGGTCACCGGGCGCGAGCTGGAGCAGGGCTCGCTCGACGACAGGACGATGCTGCAGGAGGCGGCGTCGGGGCTCAGCAACGCGGAACGCGCGGCGCTGTCGAAGTCGCACGAGCAGTTGATCAACAAGATCCGGGCGGCGATCGCCGCGCTGGCGGACCGCTCCGCCGACCAGTTCGCGGCGCTGGTCCAGGGTGCCAGGCAGGCGCGCTCGGCGCTGGCCGGGCTCGACACCGTCATCAACACGAAGATCGGCACCGTCGGCCCGAGCGTGCCGGAGCTGACGCGTTTCATCGACCGCGTGATCGGCTCGCTCGAACGGAGCAAGGGGGCGCCCGGCGAAAAGCCGGCGGAGGTCGCGGCCCAGCCGGCCGCGGCCGCCCAGGCCAACGGGTATACGGCGCAGGGCAACGGCCATGCGGAACCAGCCGCGGCCGGCATGTCGACCGCCGGGCTGCCGGACCGGATCTCGTCGCGCGACGAGGTGGTGAAATGCCTCGACCTCGTCATCTCCTTCTACGACCGCACCGAGCCGTCGAGCCCCATTCCGCATCTGGCGCGGCGGGTGCGGCGCATGGTGCACATGGATTTCCTGGAGCTCATGGAGGACCTCGCGCCGTCGGGATTGAAGGAGTTCCGGCTGCTGGCCGGGGTTGCGGACAAGGACAAGAAGTCGGCTCAGAGAGAGCAAAAGGACCAGAAGGACGAGAGGTAA
PROTEIN sequence
Length: 396
VIDLAPWLRPLDGENPSGEDLRNDTRFHDLLRLIEPQVSVVYDDRNRPVSQATTPPDWEAVLTKAEELREQGRDLRLLLIVTRALSSQDGLAGLAQGLELIARSLDEFWDNLHPALRGGAPREAALRRINALLDLQNAQTGVLADLRQMAFFNSPGLGPVTGRELEQGSLDDRTMLQEAASGLSNAERAALSKSHEQLINKIRAAIAALADRSADQFAALVQGARQARSALAGLDTVINTKIGTVGPSVPELTRFIDRVIGSLERSKGAPGEKPAEVAAQPAAAAQANGYTAQGNGHAEPAAAGMSTAGLPDRISSRDEVVKCLDLVISFYDRTEPSSPIPHLARRVRRMVHMDFLELMEDLAPSGLKEFRLLAGVADKDKKSAQREQKDQKDER*