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SCNpilot_expt_1000_bf_scaffold_848_curated

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_848_curated_1
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1627)
DNA (1626bp) protein (542aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMC5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF69602.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1713..2702)
DNA (990bp) protein (330aa)
UPI0003CFBD04 related cluster n=1 Tax=unknown RepID=UPI0003CFBD04
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDX14121.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter ribose binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_848_curated_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2731..3690)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003622589
Uncharacterized protein {ECO:0000313|EMBL:KGF69601.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
uncharacterized LOC100491990
SCNpilot_expt_1000_bf_scaffold_848_curated_4

Not on your lists

comp(4058..4981)
DNA (924bp) protein (308aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=uncultured bacterium RepID=C6KU08_9BACT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAH89459.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_848_curated_5
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5082..5792)
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VK05_CAUST
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG10828.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_1000_bf_scaffold_848_curated_6

Not on your lists

comp(5886..7523)
DNA (1638bp) protein (546aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylesterase n=1 Tax=uncultured bacterium RepID=C6KU06_9BACT
SCNpilot_expt_1000_bf_scaffold_848_curated_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8838)
DNA (996bp) protein (332aa)
UPI0003D68FC6 related cluster n=1 Tax=unknown RepID=UPI0003D68FC6
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_expt_1000_bf_scaffold_848_curated_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9424..10479
DNA (1056bp) protein (352aa)
ATPase AAA n=1 Tax=Rhizobium loti RepID=UPI00036394C6
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:AID31653.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ClpA/B-type protease; K11907 type VI secretion system protein VasG rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10666..11853
DNA (1188bp) protein (396aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FI00_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESX71559.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein; K11902 type VI secretion system protein ImpA rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_10
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11860..12390
DNA (531bp) protein (177aa)
UPI0003CE30DF related cluster n=1 Tax=unknown RepID=UPI0003CE30DF
type VI secretion protein, vc_a0107 family; K11901 type VI secretion system protein ImpB
Type VI secretion protein {ECO:0000313|EMBL:ESY06241.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
SCNpilot_expt_1000_bf_scaffold_848_curated_11
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12394..13899
DNA (1506bp) protein (502aa)
UPI0003CFBB72 related cluster n=1 Tax=unknown RepID=UPI0003CFBB72
EvpB family type VI secretion protein {ECO:0000313|EMBL:ESZ30346.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
type VI secretion protein, evpb/vc_a0108 family; K11900 type VI secretion system protein ImpC
SCNpilot_expt_1000_bf_scaffold_848_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13930..14394
DNA (465bp) protein (155aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHM4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX29215.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K11903 type VI secretion system secreted protein Hcp
SCNpilot_expt_1000_bf_scaffold_848_curated_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14375..15139
DNA (765bp) protein (255aa)
UPI0003CFEC05 related cluster n=1 Tax=unknown RepID=UPI0003CFEC05
Type VI secretion protein {ECO:0000313|EMBL:ESZ14347.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein; K11897 type VI secretion system protein ImpF rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15145..17019
DNA (1875bp) protein (625aa)
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360ADFB
Uncharacterized protein {ECO:0000313|EMBL:CDX13969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K11896 type VI secretion system protein ImpG rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..18059
DNA (1077bp) protein (359aa)
Type VI secretion protein, VC_A0111 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TPX4_MESCW
type VI secretion protein, vc_a0111 family; K11895 type VI secretion system protein ImpH
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:ADV15359.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_848_curated_16
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18056..19498
DNA (1443bp) protein (481aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7HAP7_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESZ39223.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein; K11894 type VI secretion system protein ImpI rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_17
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19500..19997
DNA (498bp) protein (166aa)
UPI0003CEA060 related cluster n=1 Tax=unknown RepID=UPI0003CEA060
Type VI secretion protein {ECO:0000313|EMBL:ESZ63069.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein; K11906 type VI secretion system protein VasD
SCNpilot_expt_1000_bf_scaffold_848_curated_18
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19998..21332
DNA (1335bp) protein (445aa)
Type VI secretion protein, vc_a0114 family n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGE8_9RHIZ
Type VI secretion protein, vc_a0114 family {ECO:0000313|EMBL:EHH09170.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
type VI secretion protein, vc_a0114 family; K11893 type VI secretion system protein ImpJ
SCNpilot_expt_1000_bf_scaffold_848_curated_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21337..22752
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQ23_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06228.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K11892 type VI secretion system protein ImpK rbh
SCNpilot_expt_1000_bf_scaffold_848_curated_20
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22755..26306
DNA (3552bp) protein (1184aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3S9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11982.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
type VI secretion protein icmf; K11891 type VI secretion system protein ImpL
SCNpilot_expt_1000_bf_scaffold_848_curated_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26303..26824
DNA (522bp) protein (174aa)
UPI0003CFB771 related cluster n=1 Tax=unknown RepID=UPI0003CFB771
Uncharacterized protein {ECO:0000313|EMBL:ESZ30356.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K11890 type VI secretion system protein ImpM
SCNpilot_expt_1000_bf_scaffold_848_curated_22
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26827..27678
DNA (852bp) protein (284aa)
UPI0003CFC2F7 related cluster n=1 Tax=unknown RepID=UPI0003CFC2F7
Uncharacterized protein {ECO:0000313|EMBL:ESY89948.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_848_curated_23
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27692..28102
DNA (411bp) protein (137aa)
UPI0003CF518C related cluster n=1 Tax=unknown RepID=UPI0003CF518C
Uncharacterized protein {ECO:0000313|EMBL:ESY64535.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_848_curated_24
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28102..28581
DNA (480bp) protein (160aa)
UPI0003CF1E6C related cluster n=1 Tax=unknown RepID=UPI0003CF1E6C
Uncharacterized protein {ECO:0000313|EMBL:KIG19138.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
SCNpilot_expt_1000_bf_scaffold_848_curated_25
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28585..29673
DNA (1089bp) protein (363aa)
UPI0003CF144A related cluster n=1 Tax=unknown RepID=UPI0003CF144A
Uncharacterized protein {ECO:0000313|EMBL:ESY64533.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_848_curated_26
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29670..30716
DNA (1047bp) protein (349aa)
3-oxoacyl-(acyl carrier protein) synthase (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
UPI0003CFC6A8 related cluster n=1 Tax=unknown RepID=UPI0003CFC6A8
Uncharacterized protein {ECO:0000313|EMBL:ESY89952.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_expt_1000_bf_scaffold_848_curated_27
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30721..31884)
DNA (1164bp) protein (388aa)
UPI0003CFEA0F related cluster n=1 Tax=unknown RepID=UPI0003CFEA0F
Uncharacterized protein {ECO:0000313|EMBL:ESZ30579.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_848_curated_28
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31893..32336)
DNA (444bp) protein (148aa)
Uncharacterized protein n=3 Tax=Mesorhizobium RepID=V7GPC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ63063.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_848_curated_29
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32326..34626)
DNA (2301bp) protein (767aa)
UPI0003CF45F7 related cluster n=1 Tax=unknown RepID=UPI0003CF45F7
Type IV secretion protein Rhs {ECO:0000313|EMBL:ESW67932.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
type VI secretion system vgr family protein
SCNpilot_expt_1000_bf_scaffold_848_curated_30
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34791..35843
DNA (1053bp) protein (351aa)
UPI0003CE955F related cluster n=1 Tax=unknown RepID=UPI0003CE955F
Type VI secretion protein {ECO:0000313|EMBL:ESY84255.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
type VI secretion system fha domain protein; K11894 type VI secretion system protein ImpI
Displaying items 1-30 of 46 in total

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