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SCNpilot_expt_1000_bf_scaffold_848_curated_30

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 34791..35843

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE955F related cluster n=1 Tax=unknown RepID=UPI0003CE955F similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 354.0
  • Bit_score: 389
  • Evalue 3.40e-105
Type VI secretion protein {ECO:0000313|EMBL:ESY84255.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 354.0
  • Bit_score: 389
  • Evalue 4.80e-105
type VI secretion system fha domain protein; K11894 type VI secretion system protein ImpI similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 353.0
  • Bit_score: 386
  • Evalue 9.10e-105

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Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGAAATCGTTCTGACCGTCGAGAACGCTGAAAACCTGCCGGACGGAGCGCAGGCCGCATTCCGCGCGCGGGACCGCGGCTTCGGCGTCGGCCGCGCGGATGCGGACTGGACGCTGCCGGACCCGGAGATGATCGTTTCCGGCCGGCATTGCGAGATACGGTTCGATCCGGCGTCCGGGTTCTGGCTGGAGGACGTTTCCCGCAACGGCACGTATCTCAACGGCTCGCGGCAGCGGCTGGCCGAACCATATCTCCTGAAATCCGGCGACCGGCTGCGCATCGGGCGCTACATCGTCCAGGTCGCCGTCGATGCCGTGGAACTGCCGGTGGCCGCCGCGCCGGCAGCGGCGCCCGGCAACGACTTCATGGCGCCCGTCGACACGGGCCCGGCCTATCCGCCGTCCGAGNNNNNNNNNNNNNNGGCCGATATCCCCGCCCCCTCCGGGCGGCGCATACTGTCGCCCGGAGGGCCCCCGCCGGGCCAGGCCGACATCCTGCGGGAGATCGCGGCCGGCGCCGGCATCTCCCCCGAGGTGTTCCAGAGCCGCGACGCCCGCGAGGTCGCCGCCGAGATCGGCGTCGTGCTGCGGATCGTGGTCGAGGAGCTTTCGGCGATGCTGAAGGCGCGCGCCGCCGCCAAGATGATGACCAAGAGCGGCCACCAGACGATGATCAGCAGCGCCGGCAACAATCCGCTCAAGTTCGTCCCCGGCGCCGAGGAGATGCTGGAGAAGATGTTCTCGCGCCGGTCGGCCGGCTATCTCGACGCCAAGGGCAGCCTGGAGGACGCGTTCCGGGACCTGAAGACGCACGAGATCGCCACCTATGCGGCGATGCAGGCGGCGCTGTCGCGGCTGATGGAGGAACTGTCCCCCGAAACCATCGAGAAGCGCGTGGCGCCCTCGTCCTTCGGCTCGAAACGCGGCCGGTCGTGGGACGCATTCGTGAAGGCGTGGGAAGCGCGCGAACAGGCGCACGAGAACGGGATGCTGGACGTGTTCCTCGCCTATTTCAGCGAAAGCTACGCGTCCGCCTCGAAGTCGCGGAAATAG
PROTEIN sequence
Length: 351
MEIVLTVENAENLPDGAQAAFRARDRGFGVGRADADWTLPDPEMIVSGRHCEIRFDPASGFWLEDVSRNGTYLNGSRQRLAEPYLLKSGDRLRIGRYIVQVAVDAVELPVAAAPAAAPGNDFMAPVDTGPAYPPSEXXXXXADIPAPSGRRILSPGGPPPGQADILREIAAGAGISPEVFQSRDAREVAAEIGVVLRIVVEELSAMLKARAAAKMMTKSGHQTMISSAGNNPLKFVPGAEEMLEKMFSRRSAGYLDAKGSLEDAFRDLKTHEIATYAAMQAALSRLMEELSPETIEKRVAPSSFGSKRGRSWDAFVKAWEAREQAHENGMLDVFLAYFSESYASASKSRK*