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SCNpilot_expt_1000_bf_scaffold_848_curated_31

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 36010..37503

Top 3 Functional Annotations

Value Algorithm Source
type IV / vi secretion system protein, dotu family n=1 Tax=Rhizobium loti RepID=UPI00037DFA0E similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 497.0
  • Bit_score: 398
  • Evalue 8.00e-108
Uncharacterized protein {ECO:0000313|EMBL:CDX13937.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 505.0
  • Bit_score: 410
  • Evalue 4.90e-111
hypothetical protein; K11892 type VI secretion system protein ImpK similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 499.0
  • Bit_score: 395
  • Evalue 2.10e-107
  • rbh

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGACCACGTCGAAAGACGATCCATTCGGCGCAGACGACAAGGCTGACGCGGCCCGCGCGAACCGGGCGCCGTCCGAGGCCCGCAGCGGTCCATCGACGGTGGTCAAGCCCGCTCGCCCGGACGCCACCGTGTTCGACCCGGACTTTTCCGCACGGCGCGTGAAAGGGTGGACCGCCGAGCGGACGATGATCGCCGGCGGGCCGAAGGCGGCGCGGCAGCCGTCCGCGCCCGCCCGGCAGGCGCCGGCTCTCACGCAGGTGCTCGATGCCGCGCGGACGGCGCATCACCCGACCGCGAACCCGTTCATCGCCGCGGCGGCGCCGGTCTTCATCCTGCTCGGGCATCTCCAGCTCGTGCCGGTCGACCTCGATGCGGCAACGGCGGCCGGCGATCTCGCCGGCATGGTCGAAGCCTTCGACAGGGACATCGGCCTCGCCGGCGTCGACGAGGCGGACATGCGCATCGCCAGCTACGCCCTGTGCGAGACGATCGACGACATCATGGCCGCCTTGCCGGGATTCAGCCGCGAATTCTGGCTGCCGCAGGGCATGCTGTCGCGCTTCTTCGACACCGGCTCGGCCGGTGGCGGCTTCTTCGCCGCGCTCAACAAGGTGCTCGCCGAGCCGGCCGGGCATGGCGACCTGCTGGAGTTCATGCACGCCTGCATCGCGCTCGGCTACAAGGGCCAGTATCGCGCGCAAGGCGCGGCGAGGCTGGAGCAGGTCCGGCGGGACGTCTACGAGACGCTCCGCTATTTCAGGCCGAGGCCTCCCGCCGAGCTGTCGCCGCAATGGCAGGGCCAGGACATCAGGGCGGCCGGTCCCCGCAAGCGCGTCCCGCTCTGGGCGATCGCGGCCGCGGCTGTCGCGATCGTCGCCGGCGCGTTCTTCGAGCTCCGCTCGCTCGTCACCGACGACGGAGAAGCAGTTGCCGCTGAATTGACCTCGCTCGGCCGCTTCGAGCCGGCCCGCATCTCGCATGTCGCGTTCACCGTGGCCGTCAAGGAGCCGGAGCCCGAACCGGCGCCCATTGCTCAGCCGGAACCACCGCCGCCGCCGCGCGACGTCCAGATGGAACGGCTCAACGCCGCGCTGGCGAGCGAGATCTCCGCCGGCGCGGTGAGCCTTGGCGAGAAAGGTGAATTCCTCGTCATCGCCATCGCCAATGATGAGATGTTCGGGCCGGGGCAGGCCAAGCTCAAGCCACAGTTCCAGCCGCTGGCTGCCGCGCTCGGCAAGGCGCTCGATGCCGAGGCCGGGCCGATCATGGTGGTCGGCCACACCGACAGCGACAAGCCCGGGCGGCGCAGCGCCTTCAAGTCGAACTTCGACCTGTCGGTCGCCCGGGCGGAAGCCGTGAAGGAAGCGATCGCGCCGGCAATCGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNGACGCGCGAAGAACCGCCGAGTCGAGCTGCTGATCGCGCGCGAGGCCCCGCAATGACCGAGCGATCGCGTCGCGCATGA
PROTEIN sequence
Length: 498
MTTSKDDPFGADDKADAARANRAPSEARSGPSTVVKPARPDATVFDPDFSARRVKGWTAERTMIAGGPKAARQPSAPARQAPALTQVLDAARTAHHPTANPFIAAAAPVFILLGHLQLVPVDLDAATAAGDLAGMVEAFDRDIGLAGVDEADMRIASYALCETIDDIMAALPGFSREFWLPQGMLSRFFDTGSAGGGFFAALNKVLAEPAGHGDLLEFMHACIALGYKGQYRAQGAARLEQVRRDVYETLRYFRPRPPAELSPQWQGQDIRAAGPRKRVPLWAIAAAAVAIVAGAFFELRSLVTDDGEAVAAELTSLGRFEPARISHVAFTVAVKEPEPEPAPIAQPEPPPPPRDVQMERLNAALASEISAGAVSLGEKGEFLVIAIANDEMFGPGQAKLKPQFQPLAAALGKALDAEAGPIMVVGHTDSDKPGRRSAFKSNFDLSVARAEAVKEAIAPAIAXXXXXXXXXXTREEPPSRAADRARGPAMTERSRRA*