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SCNpilot_expt_1000_bf_scaffold_848_curated_32

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 37500..41000

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Rhizobium loti RepID=UPI00035E1C7F similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 999.99
  • Bit_score: 1328
  • Evalue 0.0
Type VI secretion protein icmf {ECO:0000313|EMBL:AID31676.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 999.99
  • Bit_score: 1327
  • Evalue 0.0
hypothetical protein; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1319
  • Evalue 0.0
  • rbh

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
ATGATCTGGCTGCTTCGTCTTTTCGGGCTGGTCGCGCTCGCGGGCTTCGCCGCCGCGGTGTGGTATGCGGGGCCGCTGATCAGCTTCAACAACAGGCCGGTGCTGGAGTCGGAGTGGAGCCGGCTGGCGGTCATCGCGGTGGCCGCCGGGCTGGTGCTCGCCTACTACGGAACGCAGCTGCTGCGGGCCCGCGCCGCGCAGAAGCGGCTCGAGCTCGCCCTGGCGCAGGGCAGTGCGGAGGAGAGCGACGCGGGCGTGCTGGAAGCCCGCATGGCGGAGGCGGTCGAGAGGCTGAAAAGCGCGACCGGAAAGCGAACCTTCCTCTACGAGCTGCCCTGGTACGTGATCATCGGCCCGCCGGGCGCCGGCAAGACCACGGCGCTCGTCAATTCGGGCCTGAATTTCCCCCTCGCCGGCTCGGGCGTCGCGCAGCCGGTGGCCGGCGTCGGCGGCACGCGATATTGCGACTGGTGGTTCACCGACGAGGCGGTGCTGGTCGACACCGCCGGGCGGTACACGACGCAGGATTCGGACGCACGGCGCGATGGCAAGAGCTGGCTCGCCTTCCTCGCGGGGCTGAAACGCTCCCGCCCGACGCAGCCGCTCAACGGCGTCATCCTGGCCTTCAGCATACAGGACCTGATCACGCTCAACGGCCAGGAGCTGGGCGCGCATGTCAGCGAGATCCGCAACCGGCTGCGCGAGATCCACGAGACGCTGCGGATCGGCTTCCCGGTCTACGTGTTGTTCACCAAGGCGGACCTCGCCAAGGGGTTTTCCGAGTTCTTCGACGATCTCGACGAAACGGCCCGCCGCCAGGCCTGGGGCGCCACGTTCCGGCCCGGCGAGACAGCGGCGGACGCCCCTGCCCTGTTCGACGGACTGTCGGCGCGGCTGTCGCAGGAGACGACCGACCGGCTGGCCGAAGCCGGCGACCTGCCGGGCCGCAACGCCATCTTCGGCTTCGCCTCCCAGTTCGAGGCGCTGAAGGAGCCGATCCTCAACTTCCTGAACGGGGTGTTCGAGCCGGCACGGCCGCCGGTGCCGGCGACGTTGCGAGGCTTCTACTTCTCGTCGGGAACCCAGGAAGGGACGCCGATCGACCGCTTCCTCGGCACGGTCGGCCGTGCGTTCGGCGGCAGCGGCGAGGCGAGGCTCTCGGGGACCGGCAAGAGCTTCTTCCTGCACGACGTGCTCGGCAAGGTCATCTTCGGTGAATCCGGCCTGGTCTCCTCCGACGCCGCGCTGGAGCGGCGCGCGGCCTATCTGCGATATGGCGGAATGGCGGCGGTCGCGCTCGCCGCCCTCGCCCTGCTCGGCATCATCGGGTCGAGCTTCCTGGCCAACCGGCAGCTCGTCGCCGCCACCGGCGAGGCCGTCGGCCAGTACAATGCCGCCGCGCAGCCGCTGCTCGCCGCGCCGGCCGTGGCCGACACGGATTTCGAGACGGTGATCGGCGCGCTCGACGAGGTCCGCAGCCTGCCGGCCGGCTACGACAACCGGACCCCGGCCTCGACGCTCGAACAGGGCCTCGGGCTGGGCCAGCGCGACCGGCTGGTGTCGGCCTCCGAGCATACCTACCGGGCCGCGCTGGAGCAGATGTTCCGGCCGCGCCTGCTGCTCTACCTGGAACGCGCGATAGACAAGGAAAAGGCGAACGCAGTCGCTCTGTACGAACCGCTCAAGGTCTATCTGACGCTCGGCGGCAAGGCGCCGCGCAGCAATGACGACCTCGTCATCTCCTGGTTCGCGCGCGAATGGCAGACCCTCTATCCCGGCCCGCAGAACCGCACCGGCCGCGAGCAGCTCGTACGGCACCTTCGCGCCATGCTGTCGCTCGACGACGCGTTCAATCCGAACTACGACCTCAACCAGCCGCTGATCGAGGGCGCGCAGCGGTCGCTCGGCCAGCTCACGCTGGCGCAGCGCGCAGCGGCGATCATGGGATCGGTGCGTCGCACGGCGGAACCCTATGACCTCTCCCTCGGGCAGCGCGCCGGCGGCGAAGCGCCGGTGGTGTTCGAGACCCTCTCGGGCGAGAGCATCAACGCCCTGCGCGTGCCCGGGCTGTATACCTACACCGGCTTCAGGAACGTCTTCCTGAAACAGCTTTCGCAGGTCGCCCAGCGGCTCGTCGACGAGCGCTGGGTCATCGGCTCCGGCGGCGAGCAGATCGACCTCGGCGCGGAGCTGCCGCAGCTCGGTCCCGAGCTGGTCGACGGCTACGGCAAGGAGTTCGTGGCCGCCTGGAACAAGGAACTCGCCAAGCTCAAGTTCAAGCCGATGGCGGAGGACAAGCCGGACTACATCCGGCTTTCGGCCGCGGCGAATGCCGATTCGCCGATCGTGCGCCTCGTCGAGGCGGTCGCGGCCGAGACCGCGCTGACGCGCGACCTCGCCGCCCTCGGGGAAGGAGACGCCGGCGCGGCGCTGGCGGAAGGGCTGCGCAAGATCGGGATCGTCCTGCCCGGCGGGAAATCGCAGAACCGCGCGGGCTCGACCGACGTCTCCGTCGGCCGCAATCCCGGCGCCGCGATCGAGGCGCAGTTCCGCCCCTGGCAGGAGATCGTCGGCGGTCCGCCGGGACGCCGCCCGATCGACTCGCTGACGCGCAATCTGCGCGACATCTACCAGAGCCTGCTGGTGTCGGCCTCGCTGCCGGCGCGGGCGGAGGGGATCGATTCCAACCTCCAGCTCCAGATCTCGAACCTGCGCGCCAATGCCTCGCGCCTGCCGCGCACGCTGGGCCACATGGTCGCGGCAATCGCCGACGAGATGGAGGGCGACGCCGCCGAAACCTCGATCCAGCAGCTCACCAAGAAGCTGAACGAGACGGTGACGGCGGCCTGCGAGGCGGCGATCGCGAACCGCTATCCCTTCGTCCCGACGAGCAGCGAGGACGTCCCGCTCGCCGATTTCTCCAGCCTGTTCGCTCCGGGCGGCACGCTCGACCGCTTCTTTGCCCAGAACCTCTCGGTCCTGGCCGACACCAGCGGCTCCGCCTGGCAATGGCGGCAGGACACCCGCCTCGGGCGGGAATTGTCCCCGGAGACGCTGCGCAACTTCCAGCGCGCCGCCGAGATCCGCGACGCCTTCTTCTCGGGCTCGCAGCCCAATCCCGCCGTCACGCTGACCATCACCCCCTTCTCGCTCCACCGCGACGCCGACGTCGCGACGCTGGATGCCGAGGGACAGGTGATCCAAAGCTACCAGACCGGCAACAGCCCGAGCCAGTTGCTGTGGCCGGGCGCGGGCAGCGGCAGGGTGCGGCTCAGCCTGTCGCCGGAGCTTCCCGGCCGCGATTCGGCGATCAGGTTCGAGGGCCCGTGGGCATTGAAGCGGCTGCTCGACCAGGCGACCTTCAAGAGCGAGGGCGACAGGCTGGAGATGCGTTTCCTGATCGGCGGCCGCGACGTCGCCTACACGGTCGCGACGGACCGCGGCGGGCAGCCGCTCGGCGGCCCCGCCCTTTCGGCGTTCAAGTGCCCGCAGAACCTGTGA
PROTEIN sequence
Length: 1167
MIWLLRLFGLVALAGFAAAVWYAGPLISFNNRPVLESEWSRLAVIAVAAGLVLAYYGTQLLRARAAQKRLELALAQGSAEESDAGVLEARMAEAVERLKSATGKRTFLYELPWYVIIGPPGAGKTTALVNSGLNFPLAGSGVAQPVAGVGGTRYCDWWFTDEAVLVDTAGRYTTQDSDARRDGKSWLAFLAGLKRSRPTQPLNGVILAFSIQDLITLNGQELGAHVSEIRNRLREIHETLRIGFPVYVLFTKADLAKGFSEFFDDLDETARRQAWGATFRPGETAADAPALFDGLSARLSQETTDRLAEAGDLPGRNAIFGFASQFEALKEPILNFLNGVFEPARPPVPATLRGFYFSSGTQEGTPIDRFLGTVGRAFGGSGEARLSGTGKSFFLHDVLGKVIFGESGLVSSDAALERRAAYLRYGGMAAVALAALALLGIIGSSFLANRQLVAATGEAVGQYNAAAQPLLAAPAVADTDFETVIGALDEVRSLPAGYDNRTPASTLEQGLGLGQRDRLVSASEHTYRAALEQMFRPRLLLYLERAIDKEKANAVALYEPLKVYLTLGGKAPRSNDDLVISWFAREWQTLYPGPQNRTGREQLVRHLRAMLSLDDAFNPNYDLNQPLIEGAQRSLGQLTLAQRAAAIMGSVRRTAEPYDLSLGQRAGGEAPVVFETLSGESINALRVPGLYTYTGFRNVFLKQLSQVAQRLVDERWVIGSGGEQIDLGAELPQLGPELVDGYGKEFVAAWNKELAKLKFKPMAEDKPDYIRLSAAANADSPIVRLVEAVAAETALTRDLAALGEGDAGAALAEGLRKIGIVLPGGKSQNRAGSTDVSVGRNPGAAIEAQFRPWQEIVGGPPGRRPIDSLTRNLRDIYQSLLVSASLPARAEGIDSNLQLQISNLRANASRLPRTLGHMVAAIADEMEGDAAETSIQQLTKKLNETVTAACEAAIANRYPFVPTSSEDVPLADFSSLFAPGGTLDRFFAQNLSVLADTSGSAWQWRQDTRLGRELSPETLRNFQRAAEIRDAFFSGSQPNPAVTLTITPFSLHRDADVATLDAEGQVIQSYQTGNSPSQLLWPGAGSGRVRLSLSPELPGRDSAIRFEGPWALKRLLDQATFKSEGDRLEMRFLIGGRDVAYTVATDRGGQPLGGPALSAFKCPQNL*