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SCNpilot_expt_1000_bf_scaffold_848_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 16983..18059

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0111 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TPX4_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 358.0
  • Bit_score: 476
  • Evalue 2.80e-131
type VI secretion protein, vc_a0111 family; K11895 type VI secretion system protein ImpH similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 358.0
  • Bit_score: 476
  • Evalue 8.90e-132
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:ADV15359.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 358.0
  • Bit_score: 476
  • Evalue 4.00e-131

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCCGATGACGCTCGGCAACCGCCACCTGATCTGAAGCCGGCCGGCCCGCGCGGGCACGGCGGGGTGAACGCCTCCTTCGACTTCTTCGAGCTGCTGCGGCAACTGGAGAGCGGCGACAAGCGCTTCGGGCAGAAGGGCGGCCCCGAGCGCGAGCCCGCGCGGCTCGGCCAGCAGATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGAGGAGGCGTCCGGCGGGCGGGCGCCGCAGGTGACGATCGCCAATCTCGGCCTGCTAGGCCCCGAAGGCCCGATGCCGATCCACATCACGCGCTGGGTGCTCGACCGGCTGTCGCAGCGCTGGTTCGCCGGGGCCGAGGCGCGCCAGACGGCCGACACAACCTTCGTCGACTTCGTCAACATGCTGCAGCACCGCATGATGGCGCTCTACTATCGCGCCTGGGCGGACCACAGCCCGGCGGTGCAGGTGGAGCGTCCGGTCAGCGGGCGCGTGCGCGCCATGCTGGAAGCCATGGCAGGCATCGGCCTGCCCGGCACGCACAATGGCGAGGACCCCTCGCTCGACATGGTCAAGCTGAAGCAGGCCGCCGCGCTCGCAAGCCAGGTCGACGGGCCCGAGCGCCTCACCCTGTTCATCTCCGAGGCCTTCGACGTGCCCGTGGCGATCAAGGAATTCGTCGCCGCGTGGGTGCCGATCCCGCGCGGCCTGCAAAGCCGGCTCGGGCAGGCCTACGCCGTGCTCGGCGGCGGCGCGACGGTCGGAAGCCGGACCTTTTCCCGGCAGAGCCGGGTCGAGCTGGTGATCGGCCCCGTGGGCATCAGGGACTACCTGTCCTTCCTGCCCGACGGGGACCGACATCCGGCCCTGAAGCGCGCCATCCGCGACCTCGTCGGCGAGCAGATCGACGTCGACGTGCGCGTCGTCCTCAGGCAAGCGGAGGTGCCCAAGCCGAACCTCGGCAGCGTCCGGCTGGGGCGGACGAGCTGGCTTGCGCGCCCGGATGAAAAGGGGGATGCTGACGAGATGCGACTGCGGGCAGTCGTCGGTTGGCGGCCCGAAAACCCAGGGGCAGGCGCATGA
PROTEIN sequence
Length: 359
MADDARQPPPDLKPAGPRGHGGVNASFDFFELLRQLESGDKRFGQKGGPEREPARLGQQIXXXXXXXXXXXYEEASGGRAPQVTIANLGLLGPEGPMPIHITRWVLDRLSQRWFAGAEARQTADTTFVDFVNMLQHRMMALYYRAWADHSPAVQVERPVSGRVRAMLEAMAGIGLPGTHNGEDPSLDMVKLKQAAALASQVDGPERLTLFISEAFDVPVAIKEFVAAWVPIPRGLQSRLGQAYAVLGGGATVGSRTFSRQSRVELVIGPVGIRDYLSFLPDGDRHPALKRAIRDLVGEQIDVDVRVVLRQAEVPKPNLGSVRLGRTSWLARPDEKGDADEMRLRAVVGWRPENPGAGA*