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SCNpilot_expt_1000_bf_scaffold_848_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 19998..21332

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, vc_a0114 family n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGE8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 444.0
  • Bit_score: 761
  • Evalue 4.20e-217
Type VI secretion protein, vc_a0114 family {ECO:0000313|EMBL:EHH09170.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 444.0
  • Bit_score: 761
  • Evalue 5.90e-217
type VI secretion protein, vc_a0114 family; K11893 type VI secretion system protein ImpJ similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 444.0
  • Bit_score: 756
  • Evalue 4.20e-216

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGACCGATGCGAACAGAGTGCTGTGGTCCGAGGGCCTGTTTCTCCGGACGCAGCATTTCCAGCAGCAGGACCGTTTCATCGAGGCGAGCGCGCGCGGGGTGCTGCAGGCCGCGCGGCTTCAATCCTTCGGCTTCCGTGAGCTGACGCTCGACCAGGCGCTGCTCAAGGCGGGGCAGGTCTCGATCGTGGCGGCCCGCGGCATCTTTCCCGACGGCACGCCGTTCTCGATTCCCGAGACGATGGACGCGCCGCGTCCGCTCGCGGTGACGGCCGACACGGCGGCCGGCGCCGTGCTGATCGCGCTGCCGCTGGAGCCGGTCGGCGGCGTCGCCTTCGATCCGGCGCATGCGAACGCGAGCGGCGCGCGCTATCGCGGCAAGATCCTGACGGTGAACGACGCCGTGCAGGGCGGCGCCGACGCCGAGGAGATCGAGATCGCCCGCCCGCAGGCGGTGCTTTTGCCGCCCGGCAAGTCGGTCGGCGGCTATACCGCGCTCCCCGTCGCCGAGATGCGCGGCCTGCGCGCCGACGGCAGCGTCGCGCTGGTCGACACGTTCCTGCCGCCGACGCTGGTCACCTCGGCGGTGCCCTGGTACGCGCAGTTGCTGCAGGAGATCATCACCGGGCTGGACCACATCGCCGACGCCCACGGCGCCGTCGTGCTGGGCGGGCCGGGGCGCAGCGTCGAGGACCTGCTGATGCTCAACCTCGCCAACGCGGCCCGGCCGCGGCTGGCGCACATGCTGGCGCAGGAGGTGTTCCACCCGGCCGAGCTCTTCCTGGAGCTCGCGGGCCTCGCCGGCTCGATGGCGACCTACGGGTCGAGCTCGCGCAGGCTGGCGGAGCTGCAGGCCTATGACCACATGTTCCCCGGCGTGCCGTTCAACGCGCTCGCCGACATATTGCGGTCTCTGATCCTGAGCATGCGCTATGTCGAGCCGAAGTCGCGCGCGCTGCCGGTGATGCGCCACTCGACCAACGTCTGGAAGGTGCGCATCGACAACCCGAAGATCCTGACGTCGAGCCGGATCGTGGTGCGGGTCGGATCGGAGCTTTCCGAGGACGCGCTGCGCAAGATCTTCGTCAACCAGGCGACGGTGGGCTCCTCGGACGAGTTCGAGGGACTGTGGAAGTCGCGCCTGCCGGGAATACCGCTGAAGCCATTGCACTCGCAGCCGCGCGAGATCCCCTATGACGGCGACCGCCTCTGCCTGGAGCTCGACCAACGCAGCGAGCACTGGGCCTCGCTGCTCGACGCGCCCGGCTTCGTCATCGGCGTGTCGGGCGTGCTGCCGAGCGAACCGCAGGTCGACTGTTTTTCGGTGAACAGGTGA
PROTEIN sequence
Length: 445
MTDANRVLWSEGLFLRTQHFQQQDRFIEASARGVLQAARLQSFGFRELTLDQALLKAGQVSIVAARGIFPDGTPFSIPETMDAPRPLAVTADTAAGAVLIALPLEPVGGVAFDPAHANASGARYRGKILTVNDAVQGGADAEEIEIARPQAVLLPPGKSVGGYTALPVAEMRGLRADGSVALVDTFLPPTLVTSAVPWYAQLLQEIITGLDHIADAHGAVVLGGPGRSVEDLLMLNLANAARPRLAHMLAQEVFHPAELFLELAGLAGSMATYGSSSRRLAELQAYDHMFPGVPFNALADILRSLILSMRYVEPKSRALPVMRHSTNVWKVRIDNPKILTSSRIVVRVGSELSEDALRKIFVNQATVGSSDEFEGLWKSRLPGIPLKPLHSQPREIPYDGDRLCLELDQRSEHWASLLDAPGFVIGVSGVLPSEPQVDCFSVNR*