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SCNpilot_cont_300_bf_scaffold_317_curated_15

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 13401..14576

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbL n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000376D2FF similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 393.0
  • Bit_score: 553
  • Evalue 1.50e-154
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KGE79708.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 387.0
  • Bit_score: 540
  • Evalue 2.40e-150
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 396.0
  • Bit_score: 530
  • Evalue 4.30e-148

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGGTAGCTTCCTTTCGCCCCTCGAAAATCCTGACCGTCGCCGCCGTCGCGGGATTGGTTCTGTGGACGATCCATCCGGCCGTGGCCGCTGACGGCAGCGTACTGACCACGGTGGAGAATCAGGTCGTCACAGCCGCGAAAGGCTGGGAAACAACGGTCACGAACGCCGCGAAATCGCTGTTCTGGATTCTGGCCGGCATTGAGGTCGGTATCGCCGCGGTCTGGCTCGCCATTCAGGCGGCGAGCATCGAAGCCTGGTTCGCCGAGCTGGTGCGCCGGATCATGTTCATCGGCTTCTTCGCCTTTGTCCTGACCCAGGGGCCGAGTTTCGCCAAAGCGGTCGTGGACAGCCTGTTCGAGATCGGTGGCGGCTCCGGCTCGGCCTCGCCGGCGAACGTCTTCAATGCCGGCCTGACGGTCGCTTCCGCCATGTCGCAGAAGATCTCCTTCGGCGTGTTTCAGGATAACGCGCTGGCGCTGTCGGCCTCGCTCGCCATGATCGTCAGTGTCATCGCCTTCTCGCTGGTTGCGGCGATCTTCCTCGCGGTGCTCGTCGAGATGTATGTCGGGCTTCTGGCCGGCATGATCATGCTCGGCCTCGGCGGCTCGTCCTTCACCAAGGACTTCGCGATCCGCTATCTCGTATACGCCTTCTCCGTCGGCATGAAGCTCATGTCGCTGGTGATGATCGCCAAGATCGGCTCCGACGTGCTGATCGGGCTCGCGCAGGACAGCACGGTCGGCGACCAATATCAGACCGCGCTCGCGGTAGCCGGAATCGCCGTCGTTATCTTCATCCTCGCAATGTACGTGCCGACCATCGTCCAGGGCGTCGTTCAAGGCGCATCGGTCAGCGGCGGCATGGAGGTGATCCGTCACGGATCGCAGGCTGCGAGTTTCGCGGCCGGCGGCGTGGCGCTCGGCGTCGGCGGAGCGAGCGCCGGCGCGGCCGCCTTCAGCGCGGCGCGCGCAGGCGGTTCGTCGTTCGGCGGCGCCGCAATGGCAGGACTGCGCGGCGCGGCGTCTGCCGGCGGCGCGCTCGCCTCGGCCGCCCGCGACAAGGCGATCGGCGCACCCGGCGCCTATGCCGGTTCCCTGCTCGGCCTCGCCAACGCCAAACTCGACAAGGGGAGTAGCGGCTCGCCAACCCCGCCACCCGAGAAACACGACAAATGA
PROTEIN sequence
Length: 392
MVASFRPSKILTVAAVAGLVLWTIHPAVAADGSVLTTVENQVVTAAKGWETTVTNAAKSLFWILAGIEVGIAAVWLAIQAASIEAWFAELVRRIMFIGFFAFVLTQGPSFAKAVVDSLFEIGGGSGSASPANVFNAGLTVASAMSQKISFGVFQDNALALSASLAMIVSVIAFSLVAAIFLAVLVEMYVGLLAGMIMLGLGGSSFTKDFAIRYLVYAFSVGMKLMSLVMIAKIGSDVLIGLAQDSTVGDQYQTALAVAGIAVVIFILAMYVPTIVQGVVQGASVSGGMEVIRHGSQAASFAAGGVALGVGGASAGAAAFSAARAGGSSFGGAAMAGLRGAASAGGALASAARDKAIGAPGAYAGSLLGLANAKLDKGSSGSPTPPPEKHDK*