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SCNpilot_expt_1000_bf_scaffold_1614_curated_13

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 11232..11522

Top 3 Functional Annotations

Value Algorithm Source
ruvC; Holliday junction resolvase; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 169
  • Evalue 6.30e-40
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 169
  • Evalue 2.80e-39
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rhizobium sp. AP16 RepID=J2WB01_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 169
  • Evalue 2.00e-39

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
GTGGCGACGTTGAAGCTCGGCCAGGCGCGCGGCGTCGCCATGCTGGTCCCGGCCCGCGCCGGCCTGCCAGTGGCCGAATATGCGCCGAATGCGGTCAAGAAGGCGGTGATCGGTGTCGGCCATGGCGAAAAGCAGCAGATCCACATGATGCTGAAAATCCTGATGCCGAAGGCGGTCTTCAAGGGCAACGACGCCGCCGATGCACTGGCGATCGCCATCTGCCACGCCCATAATCGCGGCGCCGCGCGCCTGCGCATGGCGGCGCTGGCGGCGCTGGCGGCGAGCGCATGA
PROTEIN sequence
Length: 97
VATLKLGQARGVAMLVPARAGLPVAEYAPNAVKKAVIGVGHGEKQQIHMMLKILMPKAVFKGNDAADALAIAICHAHNRGAARLRMAALAALAASA*