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SCNpilot_expt_1000_bf_scaffold_2820_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(9443..10435)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HPE5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 330.0
  • Bit_score: 545
  • Evalue 3.50e-152
Uncharacterized protein {ECO:0000313|EMBL:CDM59334.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 330.0
  • Bit_score: 546
  • Evalue 2.90e-152
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 330.0
  • Bit_score: 544
  • Evalue 2.50e-152

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGACAGCCGCAGTCGAATTCCAGAATGTCTCCCGCCATTTCGGCCAGGTCCGGGCGGTCGATGGCGTCAATCTGACGATTGCGCCCGGCGAATTCTTCGCCATGCTTGGGCCCTCCGGTTCCGGCAAGACCACCTGCCTGCGGCTGATCGCCGGCTTCGAGCAGCCGACCGGCGGGCATATCGAAATTTTCGGCGAGACGGCCGAAGGCGTGCCGCCCTACCGGCGCAACGTCAACACCGTCTTCCAGGACTACGCGCTTTTCCCGCATCTCAACATCCTCGACAACGTCGCCTACGGGCTGATGGTCAAGGGCGTCGACAAGGCGACGCGCTACCGCGAGGCGGAAGCCGCCCTTGAACTGGTGAAGCTGCCGGGTTACGGCGCTCGCCGGCCCGGCCAGCTTTCCGGCGGCCAGCGGCAGCGCGTGGCGCTCGCCCGCGCCCTCGTCAACAAGCCGCGGGTGCTGCTTCTCGACGAGCCGCTCGGCGCGCTCGATCTCAAGCTTCGCGAGCAGATGCAGGAGGAGTTGAAGAGCCTGCAGCGGGCGCTCGGCATCACCTTCGTCTTCGTCACCCACGATCAGGGCGAGGCCCTGTCGATGGCCGATCGTGTCGCCGTCTTCAACAACGGCAACATCGTCCAGGAAGGCACGCCAGAAGAGATCTACAAGCAGCCGAAGGTGCGTTTCGTCGCCGATTTCGTCGGCTCCTCGAACGTGCTGGCGCCAGACGTGATGAAGCGACTGGGCGGCGAGGCGCGCTGGGCGAGCCTCAGGCCGGAGGCGATCCGCCTGAAACCGACCGGCGAGGGCGTGCCGGCCAAGGTGCTGCAGGCAAGTTTCCTCGGCGCCTCGAACCGCCTGCTGGTCGAAGCCGGGGGCGCGAAGCTGCATGTCATGCTGCCCGCCGACCAGGCGGTTCCCGCCATCGGTTCCGATATCGCCCTCGGCTGGGGCCCGGCCGATGCCCATTACATGGATGACGCGGCATGA
PROTEIN sequence
Length: 331
MTAAVEFQNVSRHFGQVRAVDGVNLTIAPGEFFAMLGPSGSGKTTCLRLIAGFEQPTGGHIEIFGETAEGVPPYRRNVNTVFQDYALFPHLNILDNVAYGLMVKGVDKATRYREAEAALELVKLPGYGARRPGQLSGGQRQRVALARALVNKPRVLLLDEPLGALDLKLREQMQEELKSLQRALGITFVFVTHDQGEALSMADRVAVFNNGNIVQEGTPEEIYKQPKVRFVADFVGSSNVLAPDVMKRLGGEARWASLRPEAIRLKPTGEGVPAKVLQASFLGASNRLLVEAGGAKLHVMLPADQAVPAIGSDIALGWGPADAHYMDDAA*