ggKbase home page

SCNpilot_expt_1000_bf_scaffold_887_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(10907..11566)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JFY2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 219.0
  • Bit_score: 321
  • Evalue 9.30e-85
Outer membrane protein {ECO:0000313|EMBL:EYR80558.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 394
  • Evalue 7.10e-107
outer membrane protein; K07275 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 219.0
  • Bit_score: 320
  • Evalue 3.80e-85
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCTTGCCGCCGGCCTGATGCTGCTTGGCAACCAGGCCCTGGCCGCCGACCTCGAAGAGCGCATGGCGCCGCCGGAAGCGGCAACCGATCTGGCGGCCCAAAGCCCCTGGCAGATCCGCGTGCGCGGCCTCGGCGTCATCACCGAAGATTCCGGGTTTGTGAACGGCATCGCCGGATCGGATCTTTCCTATTCGAACACGGTCGTTCCGGAACTCGATATCTCCTACTTCTTCACCGACAACATCGCCGCCGAACTGATCCTCGGCACGACCTATGCAAACGTCAAGGCCGATGGGGCGATTGCCGGCCTCGGCAAGGTGGGCAAGACGTGGCTTCTGCCGCCGACATTGACGCTGCAATATCATTTCACCGATTTCGGCGCCTTCAAACCCTATGTCGGTGCCGGCGTGAACTATACGCTGTTCTACAACCAGTCCGGTTCCGGTGCCTTTTCCAATCTCGATGTCGAGAACAAGCTGGGCGGTGCCCTGCAGGTCGGCTTCGACTACATGATCGACGACCATTGGGGCGTGAACTTCGACGTGAAGAAGCTCTTCCTCGAGCCCAAGTGGAAGGTCGATCTCAACGGCACGTCGCTGTCCGGCAAGGCGAAGCTCAATCCCTGGCTGATCGGCACCGGCGTCACCTACCGCTTCTGA
PROTEIN sequence
Length: 220
MLAAGLMLLGNQALAADLEERMAPPEAATDLAAQSPWQIRVRGLGVITEDSGFVNGIAGSDLSYSNTVVPELDISYFFTDNIAAELILGTTYANVKADGAIAGLGKVGKTWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTLFYNQSGSGAFSNLDVENKLGGALQVGFDYMIDDHWGVNFDVKKLFLEPKWKVDLNGTSLSGKAKLNPWLIGTGVTYRF*