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SCNpilot_expt_1000_bf_scaffold_1479_curated_9

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(8173..8889)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Martelella mediterranea RepID=UPI000361D94E similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 260.0
  • Bit_score: 349
  • Evalue 3.50e-93
Transposase {ECO:0000313|EMBL:KAJ34135.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 260.0
  • Bit_score: 354
  • Evalue 1.50e-94
integrase catalytic region similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 260.0
  • Bit_score: 296
  • Evalue 6.40e-78

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGAGCCAGCGTCGTGCGTGCGCAGTTTTCTCGGTTGATCGGTCGAGCACGCGGTATCGCAGCATTCGGCCCGACGACGCACATATCCGGGATGCGATGAGGAAGGTGGCGTCAGAGCGCCGCCGTTTCGGTTATCGCAGTATCCACGTCATGCTGGATCGACAGGGCATCGTCATGAACCTGAAGAAGCTCAGGCGGCTCTATCGCGAAGAGAGGCGACTGTCCGCAAGCGCGGTGGCAGAAAGCGTGCCTTGGGAGCGCGGCGGCCTTTGGTATTGCCGTCGCTTCCGTGTCCTGGCCGTTGTCGACGACTTCACCCGCGGTTGCCTGGCCCTGGTCATCGACACGTCACTATTAGGGCTGCGGCTTGTACGGGAGTTGGATATCATCATCGCCAAGCGCGGCAAGCCAAGGATCATCGTTTCCGATAATGGCACCGAGATGACGTGCATGGCCGTTCTCAGATGGTGCCAGGGCGTCGAATGGCATTACATCGCCCCTGGCAAGCCGATGCAAAACGGTTTCGTCGAAAGCTTCAACGGCAGCTTTTGCGACGAATGCCTCAACGAAACCCTGTTCTCATCGCTGGCGCAGGCTCGGACCGACATCACGGCATGGAAGGAGGACTATAACCGAAACAGACCACACTCATCGCTCGGAAACATCACCCTCAGCGAGTTTGCAATGAAAATGACTATGGAAAAACAGGCCGCATAA
PROTEIN sequence
Length: 239
VSQRRACAVFSVDRSSTRYRSIRPDDAHIRDAMRKVASERRRFGYRSIHVMLDRQGIVMNLKKLRRLYREERRLSASAVAESVPWERGGLWYCRRFRVLAVVDDFTRGCLALVIDTSLLGLRLVRELDIIIAKRGKPRIIVSDNGTEMTCMAVLRWCQGVEWHYIAPGKPMQNGFVESFNGSFCDECLNETLFSSLAQARTDITAWKEDYNRNRPHSSLGNITLSEFAMKMTMEKQAA*