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SCNpilot_expt_1000_bf_scaffold_2444_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(11310..12563)

Top 3 Functional Annotations

Value Algorithm Source
sarcosine oxidase beta subunit (EC:1.5.3.1); K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 417.0
  • Bit_score: 802
  • Evalue 4.80e-230
Sarcosine oxidase beta subunit family protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HFM5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 417.0
  • Bit_score: 805
  • Evalue 3.10e-230
Sarcosine oxidase, beta subunit family, heterotetrameric form {ECO:0000313|EMBL:CDN94051.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 417.0
  • Bit_score: 805
  • Evalue 2.50e-230

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCGCAAATATTCGGTTTTTGCCGTCGTCCGAGAGGCGATGCGCGGGCACAAGGGCTGGGAGGCGCAATGGGCCTCGCCCGAGCCGCGCAAGGAATACGACGCCATCATCGTCGGCGGCGGCGGGCACGGCCTGGGCGCTGCCTATTATCTGGCGAAGGAGCACGGCATCACCAATGTCGCGGTTCTGGAAAAGGGCTGGATCGGCGGCGGCAACACCGGCCGCAATACGACGATCATCCGTTCGAACTATCTCTACGAAGAGAGCATGGACATCTACGAACATGCCCTCAAGCTGTGGGAAGGCCTGAGCCAGGATCTCAACTACAACGTCATGTATTCGCCGCGCGGCGTGATGATGCTGTCGCACAACATCCACGACCAGCAGTCCTTCAAGCGACACGTCCACGCCAACCGTCTTTACGGCATCGACAACGAATGGCTGACGCCGGAGCAGGCCAAGGCCTATTGCCCGCCGCTCGATATCGCCAAGACCGCCCGCTATCCGATCAACGGTGCGGCCCTGCAGCGCCGCGGCGGCACCGCCCGCCATGATGCGGTCGCATGGGGTTATGCCCGCGGCGCTTCCGATCGCGGCGTGCACATCATCCAGAATTGCGAAGTCACCGCCATCCGCCGCGGCCCTGACGGCGCCGTCATCGGCGTCGATACCAACCGCGGTTTCATCGGCGCCAAGAAGATCGGCGTTTCGGCCGCCGGCCACACCTCTGTCATCATGAACATGGCGGATGTGCGCGTGCCGCTGCAATCGAGCCCGCTGCAGGCGCTGGTCTCCGAGCCGCTGAAGCCGATCTTCCCCTGCGTCGTCATGTCGAACACCGTGCATGCCTATATCTCGCAGTCCGACAAGGGTGAGCTCGTCATCGGCGCCGGCACCGATCAGTATAATTCCTACTCCCAGACCGGCGGCATCCAGATCATCGAGCACACGCTCGACGCCATCTGCGAACTCTTCCCGATGTTCCGCCGCGTCAAGATGATGCGCCAGTGGGGCGGCATCGTCGACAACACGCCGGACCGTTCGGCGATCCAGGGCGTCACGCCGGTTCCGGGCCTGTTCGTCAATTGCGGCTGGGGCACCGGCGGCTTCAAGGCGACGCCGGGCTCGGCGCATCTTTTCGCGCATCTGATCGCCCGCGGCGAGCCGCACCGGCTGGCAGCCGGCCTGACGCTCGATCGTTTCCGCACCGGCCGCCTGATCGACGAGGCGGCAGCAGCGGCGGTCGCGCACTGA
PROTEIN sequence
Length: 418
MRKYSVFAVVREAMRGHKGWEAQWASPEPRKEYDAIIVGGGGHGLGAAYYLAKEHGITNVAVLEKGWIGGGNTGRNTTIIRSNYLYEESMDIYEHALKLWEGLSQDLNYNVMYSPRGVMMLSHNIHDQQSFKRHVHANRLYGIDNEWLTPEQAKAYCPPLDIAKTARYPINGAALQRRGGTARHDAVAWGYARGASDRGVHIIQNCEVTAIRRGPDGAVIGVDTNRGFIGAKKIGVSAAGHTSVIMNMADVRVPLQSSPLQALVSEPLKPIFPCVVMSNTVHAYISQSDKGELVIGAGTDQYNSYSQTGGIQIIEHTLDAICELFPMFRRVKMMRQWGGIVDNTPDRSAIQGVTPVPGLFVNCGWGTGGFKATPGSAHLFAHLIARGEPHRLAAGLTLDRFRTGRLIDEAAAAAVAH*