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SCNpilot_expt_1000_bf_scaffold_1263_curated_18

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(19893..20732)

Top 3 Functional Annotations

Value Algorithm Source
Ureidoglycolate lyase {ECO:0000313|EMBL:EYR80853.1}; EC=4.3.2.3 {ECO:0000313|EMBL:EYR80853.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 277.0
  • Bit_score: 479
  • Evalue 2.80e-132
Ureidoglycolate lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1J6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 277.0
  • Bit_score: 479
  • Evalue 2.00e-132
5-carboxymethyl-2-hydroxymuconate delta-isomerase similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 278.0
  • Bit_score: 419
  • Evalue 7.70e-115

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAAACTCGTACGTTTTGGAAATCCGGGAGAAGAAAAGCCCGGCCTCATCGATGCCGACGGCAAGCTCCGTGATCTCTCTGGCATTCTCGCCGATCTCGCCGGCGAAGCGCTGGGCGAGGAAAGCCTTGCGAAGCTGAAGTCGCTCGACACCGGCGCCCTGCCGCTCGGCCCGGAAGGCGTCCGCCTCGGCTCCTGCGTCGGCAAGGTCGGCAATTTCATTGCCGTCGGTCTCAACTATGCCGACCACGCCGCCGAAAGCGGCATGGCCGTGCCCGCCGAACCGGTGCTGTTCAACAAGGCGCCGTCCTGCATCGTCGGCCCCGATGACACCGTTCTCGTGCCGCCCGGCTCGGAAAAGACCGACTGGGAAGTCGAACTGGCCATCGTCATCGGCAAGCGCGCTTCCTACGTCAGCGAAGCCGATGCGCTGGATTACGTCGCCGGCTACTGCGTCTGCAACGACGTGTCCGAGCGCGCCTACCAGCTCGAGCGCGGCGGCACCTGGACCAAGGGCAAGGGTTGCCCGACCTTCGGCCCGATCGGCCCCTGGCTGGTGACCAAGGACGAGGTCAACACCGAAAACCTCGCCATGAAGCTGACGGTCAACGGCGAACTCGTCCAGAACGGCTCGACCTCGACCATGGTCTTCAAGGTGCCGTTCCTGGTGCATTACATCTCGCAATTCATGATCCTCGAGCCGGGCGACGTCATCACCACCGGCACGCCTCCGGGCGTCGGCATGGGCATGAAGCCGCCGCGTTATCTCAAGGCCGGCGATACGATGGAAGTCGAGATCGAAGGCCTCGGCATCCAGCGCCAGACGGTCGCGCAGGCCTGA
PROTEIN sequence
Length: 280
MKLVRFGNPGEEKPGLIDADGKLRDLSGILADLAGEALGEESLAKLKSLDTGALPLGPEGVRLGSCVGKVGNFIAVGLNYADHAAESGMAVPAEPVLFNKAPSCIVGPDDTVLVPPGSEKTDWEVELAIVIGKRASYVSEADALDYVAGYCVCNDVSERAYQLERGGTWTKGKGCPTFGPIGPWLVTKDEVNTENLAMKLTVNGELVQNGSTSTMVFKVPFLVHYISQFMILEPGDVITTGTPPGVGMGMKPPRYLKAGDTMEVEIEGLGIQRQTVAQA*