ggKbase home page

scnpilot_expt_750_p_scaffold_1324_curated_15

Organism: scnpilot_dereplicated_Sphingobacterium_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 14051..15226

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000318EB47 similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 415.0
  • Bit_score: 195
  • Evalue 1.40e-46
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 405.0
  • Bit_score: 175
  • Evalue 2.70e-41
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY51364.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 405.0
  • Bit_score: 175
  • Evalue 1.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1176
ATGATGACCAATTCTGAGTTTGAAAACTTAGTCAAAGACTATCTCGAAAATAAGCTTAGTCCAGAACAGGAACAACAATTAATATTTCTGCTGACTAATAATCCTAGTGCCGATCTTTTGGCTAAATTTGACAGCTTTTACCTCAAATATTCCAAAGAAGTTTCATTAGAAAAAAATAAAAAAGACAAGATTTGGTCCAACATCCGCGCGCATTTAGTTCAAGATACCCCGTATCAAACTGATGCCATAAAAAATAGCCGTTGGAAAACCATCCTTCCTTATGCAGCCATTTTCATTGGTATAATTTCTCTTGCAGCACTTTTATTTACGCTTACCGACAAAAATAAGGATGAGACCCCTCAACACAACACTATAGTAAATCAAATCTTTCTGAAAAAACATAGCGGTCTCATTTATGCCAGCAACAATACTAACGGCAACAACATCCCATTGAAGCAATCCGAGTTCAAAACCTATGGGATTGTCAAGGATTCAGCGGGCACTCTTGTTTTTCGACAAGACGACAAACATGTTTTAGCCAACAACACGAAATTGACAATTCAAACCCAAAAAGGGCAAATACAAGCACTTGTTCTACCTGACGGTTCAAAAGTATGGATCAATAGCAATTCACAGATTACGTTTCCGAGAAGCTTTAATGAAAAGGAACGTCAGGTACAATTAGTCGGCGAAGGATATTTTGAGGTCACTCATCTCGATCGACAGCCCTTCTCTGTACAAGGTTTACATTATACGACCGAGGTGCTGGGAACACATTTTAATATCCAAAGTTACCCTAACAGTATAGAAAGGATTTCATTACTGGAAGGGAAAGTAAAGGTTAGTAGTCCAATGACTGTGATCCACCTTTCTCCTGGGCAGCAAGCATACGGAAAAACTGCAACACCTAAAAAAACCGAAATAGATACAACGGATATCCTGGCATGGCAGCAAGGTTATTTTAAATTCGAGAATGTGGATATTTATCAATTAACCGAACAAATTAGAGACTGGTATGATGTTAAATTTATTAAGATCAACTCACAAAGCGGGGATAGATTTTCAGGAACCTATCGACGCACCAATGATCTAAGTGATCTACTCAACAATCTAGAGGAAGTTTCCAACCTGAGATTCAACATAAAAGAAGGAGGCATTTATGTAACCAATAAATAA
PROTEIN sequence
Length: 392
MMTNSEFENLVKDYLENKLSPEQEQQLIFLLTNNPSADLLAKFDSFYLKYSKEVSLEKNKKDKIWSNIRAHLVQDTPYQTDAIKNSRWKTILPYAAIFIGIISLAALLFTLTDKNKDETPQHNTIVNQIFLKKHSGLIYASNNTNGNNIPLKQSEFKTYGIVKDSAGTLVFRQDDKHVLANNTKLTIQTQKGQIQALVLPDGSKVWINSNSQITFPRSFNEKERQVQLVGEGYFEVTHLDRQPFSVQGLHYTTEVLGTHFNIQSYPNSIERISLLEGKVKVSSPMTVIHLSPGQQAYGKTATPKKTEIDTTDILAWQQGYFKFENVDIYQLTEQIRDWYDVKFIKINSQSGDRFSGTYRRTNDLSDLLNNLEEVSNLRFNIKEGGIYVTNK*