ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5926_curated_16

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: comp(14426..14932)

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPA6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 167.0
  • Bit_score: 279
  • Evalue 3.10e-72
putative transporter; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 167.0
  • Bit_score: 279
  • Evalue 9.80e-73
Putative transporter {ECO:0000313|EMBL:BAK68087.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 167.0
  • Bit_score: 279
  • Evalue 4.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGCAGCGGCAATATGCCATCAATCCGGGCGATCAGATCGAAGTCTATGTGTGGGGCGAGGAGCGTTTGCAGCGCAGCATTCGCGTGCTGCCGGACGGCACCTTCTCATTCCCGCTCGTCGGACGCGTCGTGGCACAGGGCATGCTGCCCGAGCAGATCGAGTCGGCCATCTCCAAGGGGCTGGCCAGCCAGTATCGGGGCGAGCCGCCGCAGGTGACGGTGACCGTGCAGGAGCCGGCCGGCTTCGTTTTCTCGGTGGTCGGCCGCGTGCGCAACGCGAGCACCTTCACCCCCGGCCGTTACATCAACCTCGTCGAGGCGATCGCCATGGCCGGCGGCCCGGCGGAGTTCGCCAATCTCGATAACGTCACGATCATCCGCAAGAACGGCGGCGAACTGACGTCGATCCGGGTCCGGCTCGGCGGCGCCATGAAGGGTAATCTGCCCGACGACGCGGGCAGCATCATCCCGCAGATCCAGAGCGGCGATACGGTGATCGTTCCATGA
PROTEIN sequence
Length: 169
VQRQYAINPGDQIEVYVWGEERLQRSIRVLPDGTFSFPLVGRVVAQGMLPEQIESAISKGLASQYRGEPPQVTVTVQEPAGFVFSVVGRVRNASTFTPGRYINLVEAIAMAGGPAEFANLDNVTIIRKNGGELTSIRVRLGGAMKGNLPDDAGSIIPQIQSGDTVIVP*