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scnpilot_p_inoc_scaffold_1246_curated_12

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(13851..14750)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI000363DBEB similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 298.0
  • Bit_score: 291
  • Evalue 8.30e-76
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM31677.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 296.0
  • Bit_score: 304
  • Evalue 1.30e-79
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 298.0
  • Bit_score: 285
  • Evalue 2.40e-74

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAACATCACCTTCCGCCAGATTCGCTATTTTATCGCGGTGGCGGAAGCACGCTCCGTATCCGGCGGATCGAGCGCGGTGGGAATCTCGCAATCGGCTGTCACCGATGCGATCCGCACGCTGGAACTGGAAACGGGCGTCACCTTGTTCCACCGTCATGCCAAGGGCGTTACGCTTACGCGGGAAGGCAGTCAGTTCCTGCGCCATGCGCGTTCCATCGTCGATGCGATTTCCAATCTCGCCGGTGGCGTCGGGCAGGGGGAAGACCAGACCGAAGGGCACATCCGCATTGGCGTGACCCCGCTGGTAACCGGCTATTTCCTGTCCGACCTGCTCTCCCGCTTCCAGCGCCTGTTCCCGCGGATTCAGGTTTCACTGGTGGAAGACAAGCGGGCCTATGTCGAACACATGCTGGTCAACGGCGAGTTGGACCTGGCCTTGCTGATCGTCTCCAATCTCGAACAGCGCAGCGCGATCGACCATGAAGTACTGCTGCGGAGCGAATGCCGCGCGTGGCTGGCGCCGTCGCATCCGCTGGCCAATGTCGATGGATTGTCGCTTGCCCAGTTGGAAAACGATCCCGTGGTGATGCTCTCGCTCGATGAGCTGGAAGGGCTGGTTGAAGGTATCTGGTCAAAATTCGATCATCCGCCCCGTGTGGCCTTCCGCACTTCCTCCATGGAAGGGGTGCGCAGCCTTGTCGGCACAGGAGCAGGGATCACCCTGATGCCCGACCTCGTCTATCGCCCATGGAGCCTTGAAGGGGATCGCATCCTCTCCAAGCGCACGCGCGAGAGCCTGCCCACCGTGGATATCGGTATTGGCTGGCGGCGGCTGACGCGGCATAGCGATGCGGCCAATATGTTCATGGAAACCGCGCAGAACCACAGGCGGCAGTGA
PROTEIN sequence
Length: 300
MNITFRQIRYFIAVAEARSVSGGSSAVGISQSAVTDAIRTLELETGVTLFHRHAKGVTLTREGSQFLRHARSIVDAISNLAGGVGQGEDQTEGHIRIGVTPLVTGYFLSDLLSRFQRLFPRIQVSLVEDKRAYVEHMLVNGELDLALLIVSNLEQRSAIDHEVLLRSECRAWLAPSHPLANVDGLSLAQLENDPVVMLSLDELEGLVEGIWSKFDHPPRVAFRTSSMEGVRSLVGTGAGITLMPDLVYRPWSLEGDRILSKRTRESLPTVDIGIGWRRLTRHSDAANMFMETAQNHRRQ*