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scnpilot_p_inoc_scaffold_1625_curated_4

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3162..4202)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM75_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 323.0
  • Bit_score: 448
  • Evalue 8.00e-123
Transcriptional activator NphR {ECO:0000313|EMBL:AKH44228.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 324.0
  • Bit_score: 472
  • Evalue 5.50e-130
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 323.0
  • Bit_score: 448
  • Evalue 2.50e-123

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGGCGCAGGGATGCGATCCATGCGATAATCGTTTGGTGACCGAACGGGACAGAACCAAGCGCGACAGGCAGGCGGAGGACGACCGGGAGTGGAGTTCGTCCGGGCTCGCCATGCGGGATGCGATCGATCAATGGCGCCACTGGGCCGCCAGCACGATTGCCCCGATAGAGGTTACCGTCTTCGATCCTGACAGCTTTGCCGCGCGCTGGGTCAGCCACGGCATTGGTCAACTGCGCCTCCTCCAGCTTCACGCCCCGGCCCAGCGTGTGACCCATACGGGCGCAGAAGGCGCCGCCATGCGGGCCACGCCTTCGATCCAGCTCGTTTATTCGCAACAGGGCGCGATGAAGACGCTGATGGGCGGCAAGCGCTTCACGTTAGAGACCGGGCAATTCGTGCTGCTCGACAATACGCGCTTCTACCAGATGGAAATGGAGACCGAGCATCACGCCCTGGATCTGATGATGCCGCAAAGCTGGGTTGAAAAATACCTGCCCGATGTGGGCATCCATCTGGGGCGCCCCATAGACACGCGGGAAGGATGGGGCGCCCCGCTTGGCGCGCTGCTCGAATGCCTCGCCAGCCGCCTGAAGGCCAGCACTCTGCCGCGTTCGCTGATTGCCGAGCAGATCGGCAATCTGCTGGCTCTGGCAACCGGAGTGCTGGAAGCGAATGACAGCCCCCCTCCGCGCAACCGCCATCGCGGCCAGTTGGCCCGGCTCATCCTGCGCAGGATCGAGACCGATTATGCCGATCCCGACCTGACGCCCGATCGCGTGGCGGCCGATTGCGGCATTTCCAGAAGCTATCTCCAGACCCTACTCGCCGCGAGCGGCACCAGCTTCGTGCAGGAGCTTAACGCCACGAGGCTCGAACGAGCAGGCGACATGCTGTCCGACCCGCGTGCCCGCGCTCTTCCGATTGCCGAAATCGCTTATCGCAACGGCTTTCTGGACCCAGGCTATTTTTCACGCCTGTTCCGCAAACGCTTCGGCATTACCCCGCGTGAATGGCGGGCAGGCCACGCACCCCAATCCTGA
PROTEIN sequence
Length: 347
MAQGCDPCDNRLVTERDRTKRDRQAEDDREWSSSGLAMRDAIDQWRHWAASTIAPIEVTVFDPDSFAARWVSHGIGQLRLLQLHAPAQRVTHTGAEGAAMRATPSIQLVYSQQGAMKTLMGGKRFTLETGQFVLLDNTRFYQMEMETEHHALDLMMPQSWVEKYLPDVGIHLGRPIDTREGWGAPLGALLECLASRLKASTLPRSLIAEQIGNLLALATGVLEANDSPPPRNRHRGQLARLILRRIETDYADPDLTPDRVAADCGISRSYLQTLLAASGTSFVQELNATRLERAGDMLSDPRARALPIAEIAYRNGFLDPGYFSRLFRKRFGITPREWRAGHAPQS*