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SCNpilot_expt_1000_bf_scaffold_3920_curated_22

Organism: scnpilot_dereplicated_Sphingomonadales_2

partial RP 14 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: 19941..21215

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 420.0
  • Bit_score: 688
  • Evalue 7.90e-195
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 419.0
  • Bit_score: 680
  • Evalue 4.80e-193
Diaminopimelate decarboxylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3T7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 420.0
  • Bit_score: 688
  • Evalue 5.60e-195

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGGACTATTTCCAACTCAAGAACGGCGAGCTTCACGCCGAGGATGTGCCGCTGGCCGCCATTGCCCGCGAAGTGGGCACGCCGGTCTACGTCTATTCGCGCGCCACGCTGGCGCGCCACGCGCGCGTGTTCCGCGAGGCGCTGTCGGCGATCCCCAGCATCCACCTGGCCTTTGCGGTGAAATCCAACCCCAACCTGGCCGTGCTCAACGTCATCAAGGGTGAAGGCTACGGCGCCGACGTCGTTTCCGAAGGGGAGATGAAGCGCGCGCTGGCGGCGGGCATCCCGGCGGCGGACATCGTCTTTTCCGGCGTGGGCAAGTCGCGGCGGGAACTGACGGCGGCGCTGGAGGCGGGGATCGGCCAGTTCAACCTCGAAAGCGAGGAGGAAGGCGTCGAGCTTGCCGAGCTCGCCCGGGCCAGGGGCGTGAGCGCGGTCTGCGCGCTCAGGGTCAATCCCGACGTCGATGCCCGGACTCATGCCAAGATCTCCACCGGCAAGGCGGAGAACAAGTTCGGCGTCGGTTACGACGTGGCCGAGCAGATTTACAGCCGTCTTGCGCGGACCGAGGGGCTCGAGATGCGCGGGCTCGCGGTTCATATCGGCAGCCAGATCACCGATCTCGAACCCTCGCGGCAGGCCTTCGCCAAGATGGGCGAGCTGATGCGCGCGATCCGGGCGGCGGGGCATGCGGTGACTCACATGGACCTCGGCGGCGGCCTGGGCGTGCCTTACAGGGCCGGCGAAGTGCTTCCCGGCCCGGCCGAATACGGCGCGATGGTGGCCGAAGTCACGCGCGGCTGGGACGCTACGATCATGTTCGAGCCGGGCCGGGTCATCACCGGCAATTCGGGCGTGCTGGTGACCGAGGTGATCCGTGTGAAGCGGGGCGTGACCAATATTCCCTTCGTGGTGGTGGATGCGGCGATGAACGATCTCGCGCGCCCGGCCATGTATGATGCCTGGCACGATTTCGTGGCGGTGAAGCCTACCGGCGAAACTATGGTGGCGCATATCGTGGGGCCGATCTGCGAAAGTTCCGACACCTTCGCCATGCATCGCGAGATCGACACGGTGAAGGCGGGAGACCTGGCCGTGTTCCGCACCGCCGGGGCTTATGGCGCGACCATGGCCAACACCTACAACAGCCGCGCGCTGGTGCCCGAAGTGATGGTGGACGGCGGCCGCTGGGCGGTAGTGGCCGACAGGATCGAGCCCGAGACGATCTTCGCGGCCGAGCGCGTGCCGGACTTCCTGCTGACGGGCGGCACCTGA
PROTEIN sequence
Length: 425
MDYFQLKNGELHAEDVPLAAIAREVGTPVYVYSRATLARHARVFREALSAIPSIHLAFAVKSNPNLAVLNVIKGEGYGADVVSEGEMKRALAAGIPAADIVFSGVGKSRRELTAALEAGIGQFNLESEEEGVELAELARARGVSAVCALRVNPDVDARTHAKISTGKAENKFGVGYDVAEQIYSRLARTEGLEMRGLAVHIGSQITDLEPSRQAFAKMGELMRAIRAAGHAVTHMDLGGGLGVPYRAGEVLPGPAEYGAMVAEVTRGWDATIMFEPGRVITGNSGVLVTEVIRVKRGVTNIPFVVVDAAMNDLARPAMYDAWHDFVAVKPTGETMVAHIVGPICESSDTFAMHREIDTVKAGDLAVFRTAGAYGATMANTYNSRALVPEVMVDGGRWAVVADRIEPETIFAAERVPDFLLTGGT*