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SCNpilot_cont_300_bf_scaffold_679_curated_13

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 11482..12165

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HJD5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 227.0
  • Bit_score: 375
  • Evalue 4.30e-101
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AJP70811.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 227.0
  • Bit_score: 421
  • Evalue 5.60e-115
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 227.0
  • Bit_score: 370
  • Evalue 3.30e-100

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTTCGCCGATCGACCGTGCGCTACGGCGCAACGCCGGAGCCCGAGACTCCCTATCAGCGCGCGGGCCAGCAATGGGATGACCGCATCGGCTCCGGCCGTGTCCAGGCCCATAGCTGGCGGCTCGCCTGCTTTGCATCGCTTGCGCTCCTCGCCCTGACCATTGCCGGCCTGATCGGAATGGCGATGCGCGGCACGATCACCCCGTGGATCGTCCAGGTCGACAAGCTGGGCGAAGCCCAGGCCGTCGCGCCGGCCGAGGCCGACTATCGCCCGAGCGACCCGCAAATCGCTTTCCACCTGGCGCGCTTCATCGAGAATGTGCGTGGCATCCCGGCCGATCCGGTGGTGCTGCGCCAGAGCTGGCTCAGGGCCTATGAATTCACCACCGCCAAGGGCGCGCTCGCGCTCAACGACTATGCCCGCAACAACGACCCGTTCACGCAGGTCGGCAAGGTCCAGGTGGCCGTCGACGTCTCGAGCGTGATCCGCGCCTCGGACAACAGCTTCCGGATATCGTGGACCGAGCGCCGATATCAGGACGGCAGCCTTGCCGCGACCGAGCGCTGGTCGGCGATCGCGACCGTGGTGATCCAGACGCCCCGCACGCCCGATGCGCTGCGCAAGAACCCGCTCGGCGTGTTCGTCAATGCCCTCAACTGGTCAAAGGAGCTTTCGCAATGA
PROTEIN sequence
Length: 228
MFRRSTVRYGATPEPETPYQRAGQQWDDRIGSGRVQAHSWRLACFASLALLALTIAGLIGMAMRGTITPWIVQVDKLGEAQAVAPAEADYRPSDPQIAFHLARFIENVRGIPADPVVLRQSWLRAYEFTTAKGALALNDYARNNDPFTQVGKVQVAVDVSSVIRASDNSFRISWTERRYQDGSLAATERWSAIATVVIQTPRTPDALRKNPLGVFVNALNWSKELSQ*