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SCNpilot_expt_500_bf_scaffold_1277_curated_28

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(29874..31061)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 347.0
  • Bit_score: 604
  • Evalue 1.40e-169
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 365.0
  • Bit_score: 577
  • Evalue 2.40e-162
Isocitrate dehydrogenase [NADP] n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH10_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 347.0
  • Bit_score: 604
  • Evalue 9.90e-170

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGGCAAGATCAAGGTAGTCAACCCGGTCGTCGAACTCGACGGCGACGAAATGACGCGGATCATCTGGCAGTGGATTCGCGAACGGCTGATCCTGCCCTATCTCGACGTCGACCTGCATTATTACGACCTCGGCATCGAGGAGCGCGACCGCACCGACGACAAGATCACCGTCGAAGCCGCCAATGCGATCAAGAAATATGGCGTCGGCGTGAAGTGCGCGACGATCACCCCCGACGAAGCGCGCGTCGAGGAATTCGGCCTCAAGAAGATGTGGAAGTCGCCCAACGGCACGATCCGCAACATCCTGGGCGGCGTCGTGTTCCGCGAACCGATCGTCATCAAGAATGTCCCGCGGCTTGTCCCCGGCTGGACCGACCCGATCGTCGTCGGCCGTCACGCCTTCGGCGACCAGTATCGCGCCACCGACTATCGCGTCCCCGGCCCCGGCAAGCTGCGCCTGGTGTTCGAAGGCGAGGACGGCACGATCATCGACGAGGAAGTGTTCCAGTTCCCCTCGTCCGGCGTCGCGATGGCGATGTACAATCTCGACGATTCGATCCGCGATTTCGCGCGCGCCAGCATGAATTATGGCCTCGCGCGCGGCTGGCCCGTCTATCTGTCGACCAAGAACACGATCCTGAAGGCCTATGACGGCCGCTTCAAGGATCTGTTCGAGGAAGTCTATCAGAACGAATTCAAGGCCAAGTTCGAAGCCGCCGGCATCATCTACGAACATCGCCTGATCGACGACATGGTCGCCTCGGCCCTCAAATGGTCGGGCAAGTTCGTCTGGGCCTGCAAGAATTACGACGGCGACGTCCAGTCGGACACGGTGGCACAGGGCTTCGGCTCGCTCGGCCTGATGACCAGCGTGCTGANNNNNNNNNNNNNNCCACTACCGCATGCACCAGCAGGGCAAGGCGACCTCGACGAACCCGATCGCGTCGATCTTTGCCTGGACCGGCGGGCTCAAGCATCGCGGCAAGCTCGACGGCACGCCCGAGGTGACGAAGTTTGCCGAAGACCTCGAGCGTGTGTGCATCGAAACCGTCGAAAGCGGCAAGATGACCAAGGATCTCGCCCTGCTGATCGGTCCCGATCAGAACTGGCTGACCACCGAGGGCTTCTTCGAAGCGATCGTCGAAAATCTCGAAAAGAAGATGGGCGCCTGAGCCATAGGGCTTAA
PROTEIN sequence
Length: 396
MGKIKVVNPVVELDGDEMTRIIWQWIRERLILPYLDVDLHYYDLGIEERDRTDDKITVEAANAIKKYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYRATDYRVPGPGKLRLVFEGEDGTIIDEEVFQFPSSGVAMAMYNLDDSIRDFARASMNYGLARGWPVYLSTKNTILKAYDGRFKDLFEEVYQNEFKAKFEAAGIIYEHRLIDDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLXXXXXPLPHAPAGQGDLDEPDRVDLCLDRRAQASRQARRHARGDEVCRRPRACVHRNRRKRQDDQGSRPADRSRSELADHRGLLRSDRRKSRKEDGRLSHRA*