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SCNpilot_expt_500_bf_scaffold_629_curated_15

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 12699..12824

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L36 n=8 Tax=Sphingomonadaceae RepID=RL36_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 41.0
  • Bit_score: 85
  • Evalue 1.30e-14
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 41.0
  • Bit_score: 85
  • Evalue 4.00e-15
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 41.0
  • Bit_score: 85
  • Evalue 1.80e-14

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
ATGAAGATTCGCAACAGCCTGAAGTCGCTGAAGGACCGCCACCGGGATAACCGCGTTATCCGCCGTCGTGGCCGCACCTATGTGATCAACAAGACCAACCGCCGCTTCAAGGCGCGCCAGGGCTAA
PROTEIN sequence
Length: 42
MKIRNSLKSLKDRHRDNRVIRRRGRTYVINKTNRRFKARQG*