ggKbase home page

SCNpilot_expt_500_bf_scaffold_1892_curated_1

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 241..891

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraW n=2 Tax=Sphingomonadaceae RepID=T0HKI3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 211.0
  • Bit_score: 274
  • Evalue 1.30e-70
Plasmid transfer protein TraW {ECO:0000313|EMBL:AJA09638.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 214.0
  • Bit_score: 300
  • Evalue 1.40e-78
traW; plasmid transfer protein TraW; K12061 conjugal transfer pilus assembly protein TraW similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 203.0
  • Bit_score: 270
  • Evalue 5.90e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGGACCATGACGCCCAGCGTATCCGGCTCGCGGCCTTGCAGTTCGGGATGTCGATAGGGCTTGTCGCCGCCGCCGTCTTCATAGGCGCGTCAGCGCATGGTCAGACGTCGATCATTGGCCGGACCTGGCCGATTGCCGAGCCCGACGCCCTCGCCGAGATTGAGGCGCGCGCGGCGCGGCAGCCGCCGAGTATCGCCGAGCGGTTCGGGCCACGAGAAGGCTGGAGCGCTATGAAATCCGCGGCCCTCGGCGTCGCGGCGGTGGATCGGCGGCGCACCGTCATCCCCTTTCATACGCTCGCTTTCGAAATTCGCTTGCCCGATGGCAAGCTGCCCTACCCGAAGGGCTACACCTTCAATCCCCTTGCCTATGTATCGTTGCCGCAGCGGCTCGTGGTCGTGCATCCGCGTGATATTGGCTGGGCGATCATGCAAGCCCGTCCGATCGACTGGATATTGCTGGCCGGGGGAGAGACAGCATCGACCGATCCGATCGCGCTCGGTGAGAAGGTGGGACGACCGCTTTTCATCCTCGAAGAGCGTATCAGGGATCGGCTCGGACTGACCGTCGCGCCCGTCATCGTGGAGCAGGTTGGGCAGAAGCTCGAACTGCAGGAGTTCGAGATCGAACGTCGACGTCCGATTAAATAG
PROTEIN sequence
Length: 217
VDHDAQRIRLAALQFGMSIGLVAAAVFIGASAHGQTSIIGRTWPIAEPDALAEIEARAARQPPSIAERFGPREGWSAMKSAALGVAAVDRRRTVIPFHTLAFEIRLPDGKLPYPKGYTFNPLAYVSLPQRLVVVHPRDIGWAIMQARPIDWILLAGGETASTDPIALGEKVGRPLFILEERIRDRLGLTVAPVIVEQVGQKLELQEFEIERRRPIK*