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SCNpilot_expt_500_bf_scaffold_1868_curated_2

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 530..1450

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 292.0
  • Bit_score: 560
  • Evalue 1.80e-156
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 305.0
  • Bit_score: 479
  • Evalue 6.90e-133
tRNA dimethylallyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB63_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 292.0
  • Bit_score: 560
  • Evalue 1.30e-156

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGCGCTTATCGCTGGCCCCACCGCCAGCGGCAAGAGCGCATTGGCGGTCGCCCTCGCCCAGGCGCTCGGCGACGCAGAGGTCGTCAACGCCGACGCGAGTCAGGTCTATGCGGACATCCCCCTCCTTTCGGCACGGCCGGACGCGGCGGAGATGGCCGGCATCCCGCATCGCCTCTTCGGTCATGTCGATGGCGGGTCCGCCCACAATGCGGCGCGTTGGGCCGAAGAAGCGCGCCGCACCCTGTCCCACGCGCACGCCGCGGGGAAGGTTCCCATCCTCGTCGGCGGCACCGGCCTCTACCTGCGCACGCTGCTCGACGGCATCGCCCCGGTGCCCGAAATCGACCCGGATATTCGTGAAGCGGTGCGCGCGCTGCCCGTCGCCGACGCTTATGCCGCGCTCGCCGAAGCCGATCCCGCCGCTGCCGCCCGGCTCAATCCGGCCGACACGACCCGCATCGCGCGCGCGCTCGAGGTGGTGCGCGCGACCGGCCGGACGCTCGCCGCGTGGCAACAGGACCGCGGCGGCGGCATAGCCGGGGACATCACGCTGGTGCCGCTCATCCTGTTGCCGCCGCGCGACTGGCTGCGCGAGCGCTGCGACACCCGCCTTGTGCGCATGTTCGACGGCGGCGCGATCGAAGAGGTGAGCGCGCTGCTCGCGCGCCGGCTCGACCCCGATCTCCCCGTCATGCGCGCGATCGGCGTGCCGCAGGTTGCGGCGCATGTCCGCGGCGAAAGCAGCCGCGAGGCGGCGCTCGAGGCGGCGCAGGCGGCGACCCGCCAATATGCGAAGCGGCAATATACCTGGTTCCGCCACCAGCCCCCCGCCGGATGGCCACGCCACGAAGAGTCATTATCCGTCGATTCAATCAATCAAATCGCAATATTATTACGTGATAGACTGTTGACAGGATAG
PROTEIN sequence
Length: 307
VALIAGPTASGKSALAVALAQALGDAEVVNADASQVYADIPLLSARPDAAEMAGIPHRLFGHVDGGSAHNAARWAEEARRTLSHAHAAGKVPILVGGTGLYLRTLLDGIAPVPEIDPDIREAVRALPVADAYAALAEADPAAAARLNPADTTRIARALEVVRATGRTLAAWQQDRGGGIAGDITLVPLILLPPRDWLRERCDTRLVRMFDGGAIEEVSALLARRLDPDLPVMRAIGVPQVAAHVRGESSREAALEAAQAATRQYAKRQYTWFRHQPPAGWPRHEESLSVDSINQIAILLRDRLLTG*