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SCNpilot_expt_500_bf_scaffold_1864_curated_2

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(1289..1852)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 185.0
  • Bit_score: 355
  • Evalue 4.10e-95
pseudouridine synthase, Rsu; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 330
  • Evalue 3.20e-88
Pseudouridine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W904_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 185.0
  • Bit_score: 355
  • Evalue 2.90e-95

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
TTGTCCCGCCTGATCCTGTTCAACAAACCCTATGGCGTGCTGTCGCAGTTCACCGACAAGGGAATGACCGCGCCTGCGGACGGCCCGCGCGCGACCTTGTCCGACTATATCGACGTCCCCGGCGTCTATCCGGCCGGCCGGCTCGACCGCGATAGCGAGGGCCTGTTGATCCTGACCGACGACGGCGCGCTGCAGGCGCGGATTTCGTCGCCGAAGCACAAGATGCCCAAAACCTATCTGGCGCAGGTCGAAGGCGAGCCCGACGACGCCGCGCTGGCAGCGCTCGCCCGCGGCGTCACGCTGAACGACGGCCCGACCCGCCCCGCGACCGTCCGCCGCATCGACCCGCCGATGCTGTGGGACCGCGACCCGCCGGTGCGCTACCGGAAGAGCGTGCCCGACAGCTGGATCGAACTGACGATCACCGAAGGCCGCAACCGCCAGGTCCGCCGCATGACCGCCGCGGTCGGCTATCCGACGCTGCGGCTGGTTCGCTGGCGGATCGGGAGGTGGGAGATTGGGGTTTTGGGGTTGGGGGAATGGAGGGAGATTGGACTGGGTTAG
PROTEIN sequence
Length: 188
LSRLILFNKPYGVLSQFTDKGMTAPADGPRATLSDYIDVPGVYPAGRLDRDSEGLLILTDDGALQARISSPKHKMPKTYLAQVEGEPDDAALAALARGVTLNDGPTRPATVRRIDPPMLWDRDPPVRYRKSVPDSWIELTITEGRNRQVRRMTAAVGYPTLRLVRWRIGRWEIGVLGLGEWREIGLG*