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SCNpilot_cont_300_bf_scaffold_232_curated_23

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(26510..30859)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 999.99
  • Bit_score: 2765
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 999.99
  • Bit_score: 2765
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C681C similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2827
  • Evalue 0.0

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4350
ATGTCGTTCAAAAAGAACAAAAAACTCAATAGCGACTTCCAGAGCGTGACCATCAGCCTGGCATCGCCGGAGTCTATTTTGGAGAGTTCCTACGGCGAAGTGACACAGCCGGAGACTATCAATTACCGGACCTACAAACCCGAAATGGGTGGCTTGTTCTGCGAGCGCATCTTCGGGCCAGTAAAGGACTGGGAGTGTCATTGCGGGAAATACAAGCGGATTCGCTACAAAGGCATTATCTGCGACCGTTGCGGGGTTGAAGTGACCGAGAAAAAGGTTCGCCGGGAGCGTATGGGCCACATCGAACTGGTGGTGCCTGTTGCACATATCTGGTATTTCCGCAGCTTACCCAACAAAATTGGCTATCTGTTAGGTCTTTCGACCAAAAAGCTCGACCAGGTTATTTACTACGAACGGTATGTAGTTGTTCAACCGGGTGTGAAAGCTGAAGATGGCATCAACCAACTCGACTTCCTGACTGAAGACGAGTATCTCGACATCATTGACAAACTGCCCAGCAGCAACCAATACCTTGACGATAAAGACCCGAATAAATTCATCGCCAAGATGGGGGCCGAAGCGTTGGAGATGCTGCTGTCGCGTCTGAATCTGGACGAACTGTCGTATTCGCTTCGCCACTCTGCTGCTACGGATACATCGCAGCAACGGAAAGCAGAAGCCCTGAAGCGACTGAAAGTAGTAGAAGCTTTCCGGGAGGCAAACGGCCATATCGAAAACCGTCCTGAATGGATGGTGATTAAAATGGTACCTGTTATTCCTCCCGAACTGCGCCCGCTCGTCCCCCTCGACGGTGGCCGGTTTGCTACGTCCGATTTGAATGACCTGTATCGTCGGGTAATTATCCGGAACAACCGTCTGAAGCGGCTTATCGAAATCAAAGCCCCTGAAGTGATTCTGCGGAACGAAAAGCGGATGCTTCAGGAAGCCGTCGATTCGCTGTTTGACAACTCGCGTAAAGTGAACGCCGTTCGTTCAGAAGGTAACCGGGCGCTGAAATCGCTGTCCGACATGCTGAAAGGTAAACAAGGTCGTTTCCGGCAAAACCTGCTCGGTAAGCGTGTTGACTATTCAGGTCGTTCGGTTATCGTAGTAGGCCCAGAGCTGAAACTGCACGAATGTGGTTTGCCGAAAGATATGGCGGCTGAGTTGTTCAAGCCGTTCGTTATCCGCAAACTCATCGAGCGGGGCATTGTAAAAACCGTAAAATCGGCCAAGAAAATCGTGGACCGGAAAGATCCTGTAATCTGGGATATTCTGGAAAATGTATTGAAAGGCCACCCTGTATTGCTCAACCGGGCTCCAACGCTGCACCGTTTAGGTATCCAGGCGTTCCAGCCAAAGTTGATCGAAGGAAAAGCTATTCAATTGCACCCACTCGTCTGTACAGCTTTCAACGCTGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGGGTCAGGAAGCGATTCTGGAAGCGTCGTTGCTGATGCTGGCATCACACAATATTCTGAACCCTGCCAACGGAGCGCCGATCACGGTACCGTCGCAGGACATGGTATTGGGCCTGTATTATGTAACAAAAGGTCGCAAGAGCACGCCCGAGTACCCGATTCCGGGCGAAGGCATGACGTTCTATGGTGCCGAAGAGGTAATTATCGGTATCAACGAAGGTCGGATTTCGAAGCACGCCAACATCAAGTGCCGGGTTAAGGTTCGGGACGAAAATGGGGAAATCGTGTCCAAGATAATCGACACGGTAGCGGGCCGATTGCTGTTCAACCAGGCGGTTCCTGAAGAAGTGGGTTACATTAACGAACTGCTGACGAAGAAAAAACTGCAGCAGATCATTGCCTTGATCTTCAAGATTTCGGGTGGTGCGCGGACAGCTCAATTCCTTGATGAAATCAAAGAACTTGGATTCCAGATGGCCTTCAAAGGAGGTCTGTCGATCGGTCTGAGCGACGTGATGATTCCAGAAGCCAAACAAGGTCTGGTTGAAGAAGCCAAGGCCGAAGTACAAGGCGTTTGGGATAACTACCTGATGGGTCTGATCACGGAGAACGAACGTTACAACCAGGTTATTGACATCTGGACGCGCGTTAACTCCCGTCTGACCGAAACACTGATGAAGCAACTCGAAGCCGATCAGGGTGGTTTCAACTCAATCTTTATGATGATGCACTCGGGAGCCCGTGGTTCGCGTGAGCAGATTCGTCAGTTGGGCGGTATGCGGGGTCTGATGGCCAAGCCACAGAAAAACCTGCAAGGCTCGGTAGGTGAGATCATCGAAAACCCGATCCTGTCGAACTTCAAAGAGGGTCTCGACGTATTGGAATACTTTATCTCGACGCACGGTGCCCGGAAAGGTCTGGCTGATACGGCTCTGAAAACAGCTGATGCCGGTTACCTGACTCGCCGTCTGCACGATGTAGCCCAGGATGTTATCATCAGCGAAGAAGACTGTGGAACGCTGCGCGGTCTGCAGGTTTCGGCTCTGAAAGATAATGAAGATATTGTTGAGCCACTGTCCGAACGGATTCTGGGTCGTACAACGGTTCATGACATCTATGATCCGCTGTCGAAAGATCTGATCATCGGTGCCGGCGAACTGATTACCGAAGAAGTAGCCGCACAGATCGACGAAACCAGCATCGAAACGGTTGAAATCCGTTCGGTACTGACCTGCGAATCGCGTCAGGGTGTTTGTGCTAAGTGTTATGGCCGTAACCTGGCATCGGGCCGCATGGTCGATATCGGTGAGGCTGTAGGCGTTATCGCTTCGCAGTCTATCGGTGAGCCAGGTACCCAGCTTACGCTTCGTACCTTCCACGTGGGTGGTACCGCATCGAACATTGCCGTTGATGCATCGATCAAAGCGAAATTCGACGGTCTGATCGAGTTTGAAGAAATGCGGACGGTTGAATCAGAAGATGCTGAAGGTAACGCACAAACGGTTGTTATGGGTCGTTCGGGCGAAGTTCGGATTGTGAATCCTGACGACCGAAACCAGGTTCTGATCAGCAACAACGTTCCCTATGGTGCATTCCTGCGGGTGAAAGAAGGCGATATAGTGAAGAAGGGCGATGACATCTGCGCATGGGACCCTTACAACGCCGTTATCCTTTCTGAACTGACGGGTACACTGACCTTCGATGCGATTGAAGATGGTATCACCTATCGTGAAGAGTTCGATGAACAGACGGGCTTCCAGGAGATGGTAATCATCGAAAGCCGCGACAAAGCGAAGAACCCGGCTATTGTTGTACAGGGTACGACAACACTGACGCTGCACCTGCCTGATAACGATGGTGGTCCGCTTCAGAAGAGTTATAACCTGCCTGTTGGTTCGCGTCTGGTTGTAAAAGCTGGTCAGAAAATCAAAGCAGGTCAGCCACTAGCGAAAATTCCACGTAACGTTGGTAAAACCCGCGACATCACGGGTGGTCTGCCACGGGTAACGGAATTGTTCGAAGCACGGAATCCATCGAACCCGGCTGTAGTGAGCGAAATCGACGGTGTAGTAACCTACGGTACAATTAAGCGGGGTAACCGCGAAATCTTCATCGAGTCGAAAGACGGCACGAAGAAGAAATACCTGGTACCGCTGTCGAAGTTCATCCTTGTACAGGATAACGACTTCGTACGGGCAGGTGCTCCGCTATCGGACGGTGCCATTACGCCAAGCGATATTCTGGCCATCAAAGGACCGACGGCTGTTCAGGAATACCTGGTTAATGAAATTCAGGAAGTATATCGTCTGCAAGGGGTAAAAATCAACGATAAGCACATCGAAGCCATCGTGCGTCAGATGATGCAGAAAGTTGAAATTATCGACTCAGGTGACACCAACTTCCTCGAAGGACAGGTTGTGGATAAGTGGGCTTTCCGCGAAGAAAACGACAAAGTGCTCGACGCTAAAGTTGTTATGGACGCTGGTGACTCACCAAACTTCAAGCCAGGGATGATCGTTACGAGCCGTCAGCTCCGGGATGAGAATTCCAGCCTGAAACGTCGTGACATGGCTCTGGTGACTGTTCGCGATGCCATGGCTGCCGTTTCACAACCAACACTGATGGGTATTACTCAGTCGTCGTTAGGTACAGACAGCTTCATTTCGGCGGCCTCCTTCCAGGAAACCACGAAAGTGTTGAGCGAAGCGTCGATCCGTGGTAAGCGTGATACATTAGATGGCTTGAAAGAGAACGTGATCGTAGGTCACCTTATTCCAGCGGGTACAGGTATTCGTCGTTACCAAAACGCGATTGTCGGCTCGAAGGAAGAGTTGGAGACCATCACTGAATCGCGCGATCAATTCGCCCGCAGCAAAAAACGGGCAACGGTGTAA
PROTEIN sequence
Length: 1450
MSFKKNKKLNSDFQSVTISLASPESILESSYGEVTQPETINYRTYKPEMGGLFCERIFGPVKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFRSLPNKIGYLLGLSTKKLDQVIYYERYVVVQPGVKAEDGINQLDFLTEDEYLDIIDKLPSSNQYLDDKDPNKFIAKMGAEALEMLLSRLNLDELSYSLRHSAATDTSQQRKAEALKRLKVVEAFREANGHIENRPEWMVIKMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQEAVDSLFDNSRKVNAVRSEGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFVIRKLIERGIVKTVKSAKKIVDRKDPVIWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLGQEAILEASLLMLASHNILNPANGAPITVPSQDMVLGLYYVTKGRKSTPEYPIPGEGMTFYGAEEVIIGINEGRISKHANIKCRVKVRDENGEIVSKIIDTVAGRLLFNQAVPEEVGYINELLTKKKLQQIIALIFKISGGARTAQFLDEIKELGFQMAFKGGLSIGLSDVMIPEAKQGLVEEAKAEVQGVWDNYLMGLITENERYNQVIDIWTRVNSRLTETLMKQLEADQGGFNSIFMMMHSGARGSREQIRQLGGMRGLMAKPQKNLQGSVGEIIENPILSNFKEGLDVLEYFISTHGARKGLADTALKTADAGYLTRRLHDVAQDVIISEEDCGTLRGLQVSALKDNEDIVEPLSERILGRTTVHDIYDPLSKDLIIGAGELITEEVAAQIDETSIETVEIRSVLTCESRQGVCAKCYGRNLASGRMVDIGEAVGVIASQSIGEPGTQLTLRTFHVGGTASNIAVDASIKAKFDGLIEFEEMRTVESEDAEGNAQTVVMGRSGEVRIVNPDDRNQVLISNNVPYGAFLRVKEGDIVKKGDDICAWDPYNAVILSELTGTLTFDAIEDGITYREEFDEQTGFQEMVIIESRDKAKNPAIVVQGTTTLTLHLPDNDGGPLQKSYNLPVGSRLVVKAGQKIKAGQPLAKIPRNVGKTRDITGGLPRVTELFEARNPSNPAVVSEIDGVVTYGTIKRGNREIFIESKDGTKKKYLVPLSKFILVQDNDFVRAGAPLSDGAITPSDILAIKGPTAVQEYLVNEIQEVYRLQGVKINDKHIEAIVRQMMQKVEIIDSGDTNFLEGQVVDKWAFREENDKVLDAKVVMDAGDSPNFKPGMIVTSRQLRDENSSLKRRDMALVTVRDAMAAVSQPTLMGITQSSLGTDSFISAASFQETTKVLSEASIRGKRDTLDGLKENVIVGHLIPAGTGIRRYQNAIVGSKEELETITESRDQFARSKKRATV*