ggKbase home page

SCNpilot_cont_300_bf_scaffold_306_curated_23

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(21481..22386)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377B5E3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 298.0
  • Bit_score: 563
  • Evalue 1.10e-157
integrase family protein; K03733 integrase/recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 298.0
  • Bit_score: 520
  • Evalue 2.70e-145
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 298.0
  • Bit_score: 520
  • Evalue 1.20e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 906
ATGAATCACATGAATCCCGGTTCGGACTTCCTCACGCATATTCGGTACGAAAAACGGCTGAGCCATCATACGCTGACGGCGTATGCAAAAGATCTGGAGCAGTTTACGGAATTTCTGCATACTGAGTGTAATGTCGATCAGCCGGAACGCGCCGATTTTCGGCACATACGGTCATGGATTGTAAGTCTGGTGGAGGCCGACTTAGATAAATCGTCGGTGAACCGGAAGATTGCTACCCTTCGGAGTTTTTATGGCTTCCTGCTTCGTCGGAAAGTGATTGACCAGGACCCGATGGCTAAAATTCAGGCGCTGAAAGCCAGTAAAAAACTGCCTCAGTACATCGAAGAAAAACCGATGGAAACGCTGCTCAGCGAGGTCGAGTTTCCTGATACGTTTGAGGGCATCCGCGACAAACTCGTGCTTGAGCTTCTGTACGGCACCGGAATCCGGCTGAGTGAATTGATTGGACTCAAAACAGTCGATGTCAACTTGTACGAAAAAACGATTCTGGTTTTGGGGAAGCGCAACAAGCACCGGATTGTACCCCTTACGCAACCTCTTTTTGAGCTGATTCAGGCCTATAATCAGGTAAAAGAAACGGAGTTCTCAGGCCAGGCCGATAATACAGTTTTGATCGTGAGTGATAAAGGTGTGGCGGCTTATCCGGTGCTGATTCAGCGTATTGTGAAGCGACATCTGGAGTTGGTAACGACGCTCGAAAAGAAAAGTCCGCACGTATTGCGCCATTCCTTTGCTACCCACCTCCTCAATCGGGGTGCCGATCTCAACGCCATCAAAGACTTGCTAGGTCACAGTAGTCTGGCAGCTACTCAGATTTATACGCATACGAGCCTGGAGCAACTCAAGAAAACCTACGATCAGGCTCATCCAAAAGCCAAAAAATAA
PROTEIN sequence
Length: 302
MNHMNPGSDFLTHIRYEKRLSHHTLTAYAKDLEQFTEFLHTECNVDQPERADFRHIRSWIVSLVEADLDKSSVNRKIATLRSFYGFLLRRKVIDQDPMAKIQALKASKKLPQYIEEKPMETLLSEVEFPDTFEGIRDKLVLELLYGTGIRLSELIGLKTVDVNLYEKTILVLGKRNKHRIVPLTQPLFELIQAYNQVKETEFSGQADNTVLIVSDKGVAAYPVLIQRIVKRHLELVTTLEKKSPHVLRHSFATHLLNRGADLNAIKDLLGHSSLAATQIYTHTSLEQLKKTYDQAHPKAKK*