ggKbase home page

SCNpilot_cont_300_bf_scaffold_303_curated_2

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 481..1398

Top 3 Functional Annotations

Value Algorithm Source
transposase ISL3 n=4 Tax=Spirosoma panaciterrae RepID=UPI0003819FDB similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 304.0
  • Bit_score: 527
  • Evalue 1.20e-146
transposase IS204/IS1001/IS1096/IS1165 family protein similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 305.0
  • Bit_score: 497
  • Evalue 3.20e-138
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:AEI48156.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 305.0
  • Bit_score: 497
  • Evalue 1.40e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 918
TTGCGTCACTATCGCGATTGCCCAAGTGGCTTTACCGATTGGGAGCAACGAGCCCATGCCAAAGAGTGGCTGTTGTTTCCTCAGAATCTGGGGGCGCATCTGTCACTGGATGAAACGAGTCTGTCACAGGGAGAACTCTATACCATCCTAACCAACAAAGCCGCCAAGGGCGGAAAAGGTAGTATTGTGGCGATTGTGGCAGGCACTAAGGCCCAAACCGTCATGGACGTCTTGCGTAAGTTGCCTGAAAAACAGCGTAAAAAGGTCAAGGAGGTTACCCTGGACATGGCCGGTAACATGGGGCTGATTGTCAAGAAATGTTTTCCCAAGGCCACTCAGGTAACCGACCGTTTCCATGTGCAGCAATTAGCCCTAGAAGCGGTTCAGGACATGCGCATTGGGTATCGCTGGCAAGCCCTGGAAGCCGAGAATGAGGCCCTTGAGCAGGCTAAACTCAACCAGACTGAGTATCAACCAGAGCTACTTTCTAATGGCGACACGCTTAAACAGTTGCTGGCTCGCAGTCGCTATGTGCTCTATAAAAAGGCCACGGCCTGGACGCTCAGTCAGCGCGAGCGGGCTGCTTTGCTGTTTGATCGGTATCCAGATTTGAAGCAAGCTTATGAATTGAGTCAGTCTCTGAGCCACATTTTTGAGAACACGACTGATAAACTCTACGGCTTAGCTCGGTTAGCCAAGTGGCACGAGAAAGTCCGCCAAGCTGGTTTTAAGGCCTTCAACACGGTGGCTCGTTCAATCCAGAACCATTACGAAACCATTCTCAATTACTTTGACAACCGTAGTACGAATGCCTCAGCCGAGTCCTTCAATGCCAAGATTAAAGCGTTCCGAAGTCAGCTTCGAGGGGTTCGCAGCGTGGAGTTCTTCTTATATAGGCTGACTCAGTTATATGCTTAA
PROTEIN sequence
Length: 306
LRHYRDCPSGFTDWEQRAHAKEWLLFPQNLGAHLSLDETSLSQGELYTILTNKAAKGGKGSIVAIVAGTKAQTVMDVLRKLPEKQRKKVKEVTLDMAGNMGLIVKKCFPKATQVTDRFHVQQLALEAVQDMRIGYRWQALEAENEALEQAKLNQTEYQPELLSNGDTLKQLLARSRYVLYKKATAWTLSQRERAALLFDRYPDLKQAYELSQSLSHIFENTTDKLYGLARLAKWHEKVRQAGFKAFNTVARSIQNHYETILNYFDNRSTNASAESFNAKIKAFRSQLRGVRSVEFFLYRLTQLYA*