ggKbase home page

SCNpilot_cont_300_bf_scaffold_250_curated_69

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(79917..81203)

Top 3 Functional Annotations

Value Algorithm Source
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 428.0
  • Bit_score: 854
  • Evalue 1.90e-245
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 428.0
  • Bit_score: 854
  • Evalue 8.40e-245
Tryptophan synthase beta chain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3J1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 428.0
  • Bit_score: 854
  • Evalue 6.00e-245

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGCAAAGCCAATTCCAGGATTACCAGCAACCCGATGCCACCGGCCATTTCGGCAACTACGGCGGCACCTTCGCGAGCGAAACGCTCACCCACGCGATCAACGAGCTGCGCGACGCATACGCGAAGTTCAAGGACGATCCGGCCTTCCTCGCCGAATTCCACTACGAGCTGAAGCACTTCGTCGGCCGCCCCTCTCCGATTTATCACGCGGCGCGCACCAGCCGCGAGATGGGCGGCGCGCAGATCTACCTGAAGCGTGAAGACCTGAACCACACCGGCGCGCACAAGATCAACAACGTGATCGGCCAGGCGATGCTCGCACGACGCATGGGCAAGCCCCGCGTCATCGCCGAGACCGGCGCCGGCCAGCACGGCGTGGCCACCGCCACCATCTGCGCACGCTACGGCCTCGAATGCGTGGTCTACATGGGCAGCCAGGACGTGAAGCGCCAGAGCCCCAACGTCTACCGCATGAACCTGCTCGGCGCGACCGTGGTGCCCGTCGAATCCGGCAGCAAGACGCTGAAGGACGCGCTCAACGAGGCGATGCGCGACTGGGTCACGAACGTGGAAAACACCTTCTACATCATCGGCACCGTCGCCGGCCCGCACCCCTACCCGACCATGGTGCGCGACTTCCAGAGCGTGATCGGCACCGAGTGCATCGAGCAGATGCCGGCCATGCTCGCGGCCGACGGCATCACCGGCGAGGCAGAAGGCAAGCAGCCCGATGTGGTCATCGCCTGCGTGGGCGGCGGCAGCAACGCCATGGGCATCTTCCACCCCTACATTCCGTTCACGGGCACGCGCCTGATCGGCGTGGAAGCGGCGGGCGAAGGGCTCGACAGCGGCAAGCACTCGGCCTCCATCCTGCGCGGCAGCCCCGGCGTGCTGCACGGCAACCGCACCTACCTGCTGCAGAACGAAGACGGCCAAATCACCGAGACCCACAGCATCAGCGCGGGCCTCGACTACCCCGGCGTGGGCCCCGAGCACGCCTACCTGGCGGACATCGGCCGCGCAGAGTACGTCGGCATCACCGACACCGAGGCGCTCGAAGCCTTTCACTATCTGTGTCGAACGGAGGGCATCATCCCCGCCCTCGAATCCAGCCATGCATTGGCCCATGCGATGAAGCTCGCGAAGACCATGCGCCCCGACCAATCCATCCTGGTGAACCTCTCGGGCCGCGGCGACAAGGACATCGGCACCGTGGCCGACCTGTCGGGCGTCGATTTCTACGACCGCCCCTCGATGCGCGGTCTGAGCGTGAAGGGAGGCAAGTGA
PROTEIN sequence
Length: 429
MQSQFQDYQQPDATGHFGNYGGTFASETLTHAINELRDAYAKFKDDPAFLAEFHYELKHFVGRPSPIYHAARTSREMGGAQIYLKREDLNHTGAHKINNVIGQAMLARRMGKPRVIAETGAGQHGVATATICARYGLECVVYMGSQDVKRQSPNVYRMNLLGATVVPVESGSKTLKDALNEAMRDWVTNVENTFYIIGTVAGPHPYPTMVRDFQSVIGTECIEQMPAMLAADGITGEAEGKQPDVVIACVGGGSNAMGIFHPYIPFTGTRLIGVEAAGEGLDSGKHSASILRGSPGVLHGNRTYLLQNEDGQITETHSISAGLDYPGVGPEHAYLADIGRAEYVGITDTEALEAFHYLCRTEGIIPALESSHALAHAMKLAKTMRPDQSILVNLSGRGDKDIGTVADLSGVDFYDRPSMRGLSVKGGK*